BLASTX nr result

ID: Glycyrrhiza23_contig00033018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033018
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33954.1| unnamed protein product [Thellungiella halophila]     181   4e-44
gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF...   181   5e-44
emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]      181   5e-44
ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FAC...   181   5e-44
ref|XP_004145173.1| PREDICTED: homeobox-leucine zipper protein P...   181   7e-44

>dbj|BAJ33954.1| unnamed protein product [Thellungiella halophila]
          Length = 749

 Score =  181 bits (460), Expect = 4e-44
 Identities = 84/99 (84%), Positives = 92/99 (92%)
 Frame = -3

Query: 299 RAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQHQEGSWAVVDVSL 120
           RA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH +GSWAVVDVSL
Sbjct: 343 RALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSL 402

Query: 119 DHLRPTATLRSRRRPSGCLIQELPNGYSKVTWVEHVEVD 3
           D LRP    R+RRRPSGCLIQELPNGYSKVTW+EH+EVD
Sbjct: 403 DSLRPNPISRTRRRPSGCLIQELPNGYSKVTWIEHMEVD 441


>gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
           E=6.9e-08, N=1) [Arabidopsis thaliana]
          Length = 772

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/100 (86%), Positives = 94/100 (94%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 RAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQHQEGSWAVVDVSL 120
           RA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH +GSWAVVDVSL
Sbjct: 351 RALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSL 410

Query: 119 DHLRP-TATLRSRRRPSGCLIQELPNGYSKVTWVEHVEVD 3
           D LRP T  LR+RRRPSGCLIQELPNGYSKVTW+EH+EVD
Sbjct: 411 DSLRPSTPILRTRRRPSGCLIQELPNGYSKVTWIEHMEVD 450


>emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
          Length = 738

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/100 (86%), Positives = 94/100 (94%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 RAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQHQEGSWAVVDVSL 120
           RA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH +GSWAVVDVSL
Sbjct: 336 RALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSL 395

Query: 119 DHLRP-TATLRSRRRPSGCLIQELPNGYSKVTWVEHVEVD 3
           D LRP T  LR+RRRPSGCLIQELPNGYSKVTW+EH+EVD
Sbjct: 396 DSLRPSTPILRTRRRPSGCLIQELPNGYSKVTWIEHMEVD 435


>ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana] gi|75331628|sp|Q93V99.1|PDF2_ARATH RecName:
           Full=Homeobox-leucine zipper protein PROTODERMAL FACTOR
           2; AltName: Full=HD-ZIP protein PDF2; AltName:
           Full=Homeodomain transcription factor PDF2
           gi|15983372|gb|AAL11554.1|AF424560_1 AT4g04890/T1J1_3
           [Arabidopsis thaliana] gi|14276060|dbj|BAB58961.1|
           protodermal factor2 [Arabidopsis thaliana]
           gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis
           thaliana] gi|23197872|gb|AAN15463.1| Unknown protein
           [Arabidopsis thaliana] gi|332657038|gb|AEE82438.1|
           homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Arabidopsis thaliana]
          Length = 743

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/100 (86%), Positives = 94/100 (94%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 RAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQHQEGSWAVVDVSL 120
           RA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH +GSWAVVDVSL
Sbjct: 341 RALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSL 400

Query: 119 DHLRP-TATLRSRRRPSGCLIQELPNGYSKVTWVEHVEVD 3
           D LRP T  LR+RRRPSGCLIQELPNGYSKVTW+EH+EVD
Sbjct: 401 DSLRPSTPILRTRRRPSGCLIQELPNGYSKVTWIEHMEVD 440


>ref|XP_004145173.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
           gi|449474595|ref|XP_004154226.1| PREDICTED:
           homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
           gi|449516709|ref|XP_004165389.1| PREDICTED:
           homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 696

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/99 (85%), Positives = 93/99 (93%)
 Frame = -3

Query: 299 RAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQHQEGSWAVVDVSL 120
           RA+TLE+LS+GV G+YNGALQVM+AEFQVPSPLVP R+NYFVRYCKQ  EGSWAVVDVSL
Sbjct: 300 RALTLEVLSSGVGGDYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQQGEGSWAVVDVSL 359

Query: 119 DHLRPTATLRSRRRPSGCLIQELPNGYSKVTWVEHVEVD 3
           D+LRPT T R+RRRPSGCLIQELPNGYSKVTWVEHVEVD
Sbjct: 360 DYLRPTPTSRTRRRPSGCLIQELPNGYSKVTWVEHVEVD 398


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