BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033006
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   145   3e-33
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...   140   1e-31
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   103   1e-20
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   100   1e-19
ref|XP_004155998.1| PREDICTED: DNA-directed RNA polymerase III s...    99   3e-19

>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Glycine max]
          Length = 1152

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/94 (76%), Positives = 77/94 (81%)
 Frame = -1

Query: 282 MGLKHDPLPEPTKQSNMGNPLPSYPVGDSGIDKQFLTAPIKEAVDKFKLLPEFLKVRGLV 103
           MGLKHDPL  P  Q N GN LP    GDSG D++ LTAPIK AVDKF+LLPEFLKVRGLV
Sbjct: 1   MGLKHDPLQNPPNQFNGGNKLPGDHCGDSGFDQRVLTAPIKSAVDKFQLLPEFLKVRGLV 60

Query: 102 KQHLDSFNYFVKIGIKKNVRANDLIVSSRYPHIY 1
           KQHLDSFNYFV+  IKK VRANDLIV+SRYPHIY
Sbjct: 61  KQHLDSFNYFVRTDIKKIVRANDLIVASRYPHIY 94


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Glycine max]
          Length = 1166

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/95 (73%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
 Frame = -1

Query: 282 MGLKHDPLPEPT-KQSNMGNPLPSYPVGDSGIDKQFLTAPIKEAVDKFKLLPEFLKVRGL 106
           MGLKHDPL +PT  Q N GN LP    GDSG D++ LTAPIK AVDKF+L+PEFLKVRGL
Sbjct: 1   MGLKHDPLQQPTTNQFNGGNKLPGDHCGDSGFDQRVLTAPIKSAVDKFQLIPEFLKVRGL 60

Query: 105 VKQHLDSFNYFVKIGIKKNVRANDLIVSSRYPHIY 1
           VKQHLDSFNYFV+  IKK VRAN+LI++SRYPHIY
Sbjct: 61  VKQHLDSFNYFVRTDIKKIVRANNLIMASRYPHIY 95


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/64 (84%), Positives = 56/64 (87%)
 Frame = -1

Query: 192 IDKQFLTAPIKEAVDKFKLLPEFLKVRGLVKQHLDSFNYFVKIGIKKNVRANDLIVSSRY 13
           IDKQ LTAPIK AVDKF+LLPEFLKVRGLVKQHLDSFNYFV IGIKK VRAND IVS+  
Sbjct: 22  IDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVD 81

Query: 12  PHIY 1
           P IY
Sbjct: 82  PGIY 85


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Cucumis sativus]
          Length = 1158

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/88 (65%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -1

Query: 261 LPEP-TKQSNMGNPLPSYPVGDSGIDKQFLTAPIKEAVDKFKLLPEFLKVRGLVKQHLDS 85
           LPE  +K   +G+   S P+ DS IDKQF+  PIK AVDKF+LLPEFLKVRGLVKQHLDS
Sbjct: 5   LPEDASKNEKLGDN--SNPI-DSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDS 61

Query: 84  FNYFVKIGIKKNVRANDLIVSSRYPHIY 1
           FNYFV   IKK V+AND I SS  P IY
Sbjct: 62  FNYFVNTEIKKIVKANDRIESSTDPSIY 89


>ref|XP_004155998.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like,
           partial [Cucumis sativus]
          Length = 392

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/67 (76%), Positives = 54/67 (80%)
 Frame = -1

Query: 201 DSGIDKQFLTAPIKEAVDKFKLLPEFLKVRGLVKQHLDSFNYFVKIGIKKNVRANDLIVS 22
           DS IDKQF+  PIK AVDKF+LLPEFLKVRGLVKQHLDSFNYFV   IKK V+AND I S
Sbjct: 23  DSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIES 82

Query: 21  SRYPHIY 1
           S  P IY
Sbjct: 83  STDPSIY 89