BLASTX nr result

ID: Glycyrrhiza23_contig00033001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033001
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534367.1| PREDICTED: conserved oligomeric Golgi comple...    90   2e-16
ref|XP_003539975.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...    89   3e-16
ref|XP_003618197.1| Conserved oligomeric Golgi complex subunit [...    84   2e-14
ref|XP_002267657.1| PREDICTED: conserved oligomeric Golgi comple...    82   5e-14
dbj|BAF00649.1| hypothetical protein [Arabidopsis thaliana]            79   4e-13

>ref|XP_003534367.1| PREDICTED: conserved oligomeric Golgi complex subunit 7-like
           [Glycine max]
          Length = 834

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/70 (68%), Positives = 54/70 (77%)
 Frame = -3

Query: 268 VQLKPIKQLSEDFDSRERANKSANEKNEMERISSGGDFINFTYRASFSSCLPNFCYVV*F 89
           V LKPIKQL EDFDSRERA+KSANEKNEMER SSG DF + +    FSS LP+F   +  
Sbjct: 226 VHLKPIKQLWEDFDSRERASKSANEKNEMERTSSGDDFQSVSPAIPFSSWLPSFYDEL-- 283

Query: 88  LLYLEQKWKW 59
           LLYLEQ+WKW
Sbjct: 284 LLYLEQEWKW 293


>ref|XP_003539975.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
           subunit 7-like [Glycine max]
          Length = 834

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/70 (67%), Positives = 54/70 (77%)
 Frame = -3

Query: 268 VQLKPIKQLSEDFDSRERANKSANEKNEMERISSGGDFINFTYRASFSSCLPNFCYVV*F 89
           V LKPIKQL EDFDSRERA+K ANEKNEM+R SSGGDF + +    FSS LP+F   +  
Sbjct: 226 VHLKPIKQLWEDFDSRERASKPANEKNEMDRTSSGGDFQSVSPAIPFSSWLPSFYDEL-- 283

Query: 88  LLYLEQKWKW 59
           LLYLEQ+WKW
Sbjct: 284 LLYLEQEWKW 293


>ref|XP_003618197.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula]
           gi|355493212|gb|AES74415.1| Conserved oligomeric Golgi
           complex subunit [Medicago truncatula]
          Length = 755

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/73 (61%), Positives = 55/73 (75%)
 Frame = -3

Query: 277 FRSVQLKPIKQLSEDFDSRERANKSANEKNEMERISSGGDFINFTYRASFSSCLPNFCYV 98
           +  V LKPIKQL ED +SRERANKSANEK+EME +S+GGDF   +   SFS+ LP+F   
Sbjct: 206 YSKVHLKPIKQLWEDLESRERANKSANEKSEMETMSTGGDF-QSSPTVSFSNWLPSFYDE 264

Query: 97  V*FLLYLEQKWKW 59
           +  LLYLEQ+WKW
Sbjct: 265 L--LLYLEQEWKW 275


>ref|XP_002267657.1| PREDICTED: conserved oligomeric Golgi complex subunit 7 [Vitis
           vinifera] gi|296084209|emb|CBI24597.3| unnamed protein
           product [Vitis vinifera]
          Length = 838

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/73 (57%), Positives = 52/73 (71%)
 Frame = -3

Query: 277 FRSVQLKPIKQLSEDFDSRERANKSANEKNEMERISSGGDFINFTYRASFSSCLPNFCYV 98
           +  V LKPI+QL EDFDS++R NK ANEKNE+ER+ S  DF +     SFSS LP+F   
Sbjct: 223 YTKVHLKPIRQLWEDFDSKQRTNKLANEKNEVERLLSSNDFQSILPTISFSSWLPSFYDE 282

Query: 97  V*FLLYLEQKWKW 59
           +  LLYLEQ+WKW
Sbjct: 283 L--LLYLEQEWKW 293


>dbj|BAF00649.1| hypothetical protein [Arabidopsis thaliana]
          Length = 836

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/73 (53%), Positives = 56/73 (76%)
 Frame = -3

Query: 277 FRSVQLKPIKQLSEDFDSRERANKSANEKNEMERISSGGDFINFTYRASFSSCLPNFCYV 98
           +  V+LKPIKQL EDFD+++RANK ANE++E +R+SSG +F + + + SF+S L +F   
Sbjct: 223 YSKVRLKPIKQLWEDFDTKQRANKLANERSESQRLSSGDEFQSTSSQTSFASWLTSFYDE 282

Query: 97  V*FLLYLEQKWKW 59
           +  LLYLEQ+WKW
Sbjct: 283 L--LLYLEQEWKW 293


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