BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032997
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ...   120   1e-25
ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
emb|CBI21003.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508380|gb|AES89522.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  120 bits (301), Expect = 1e-25
 Identities = 63/101 (62%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
 Frame = +3

Query: 42  TATDHFPEKITPTPNFPEKTTISPDPT---SKTHVLDTLLSHKSNPKSALIFFEAVQRKR 212
           T   HFPEKI  TPNFPEK  ISP+      K   L TLLSHKSNPKSAL FF  V+RKR
Sbjct: 29  TTQQHFPEKIPSTPNFPEKIIISPESQPSEKKNRFLVTLLSHKSNPKSALKFFHQVERKR 88

Query: 213 GFVKTVDVFCLLLQILSSSPKTHVAVRYLLNNYAFGDSGPS 335
           GFVKTVD   LL+ ILSS+ KT  ++++LLNNY FGD+ PS
Sbjct: 89  GFVKTVDFISLLIHILSSNSKTCSSLQFLLNNYVFGDATPS 129


>ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  109 bits (273), Expect = 2e-22
 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
 Frame = +3

Query: 9   SSPLCTKPPLPTATDHFPEKITPTPNFPEKTTI-SPDPTSKTHVLDTLLSHKSNPKSALI 185
           SS L +   LP   DHFPEK+T T +FP K    +P   S+  VLDTLL HK++P+SAL 
Sbjct: 22  SSQLFSTHLLPPDADHFPEKMT-TSDFPGKIPPEAPCIPSQKQVLDTLLLHKADPRSALR 80

Query: 186 FFEAVQRKRGFVKTVDVFCLLLQILSSSPKTHVAVRYLLNNYAFGDSGPS 335
           FF+ V+ K GF KT DV CLLLQIL+S+P+TH   ++LLN Y FGDS P+
Sbjct: 81  FFKQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYVFGDSAPA 130


>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/128 (40%), Positives = 71/128 (55%), Gaps = 18/128 (14%)
 Frame = +3

Query: 9   SSPLCTKPPLPTATDHFPEKITPTPNFPEKTTISP------------------DPTSKTH 134
           S  L   P  P    +FPEKI+P  +FP  ++ SP                   P S+ H
Sbjct: 44  SESLTHFPEDPNPKANFPEKISPESSFPGNSS-SPYPRYSQDTVPTSQIHQETTPLSQNH 102

Query: 135 VLDTLLSHKSNPKSALIFFEAVQRKRGFVKTVDVFCLLLQILSSSPKTHVAVRYLLNNYA 314
           V+D LL H ++P+SAL +F+  + +RGF++ VD +C+LL IL  SP+TH   R LLN Y 
Sbjct: 103 VIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYV 162

Query: 315 FGDSGPSP 338
            GDS PSP
Sbjct: 163 SGDSDPSP 170


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/94 (44%), Positives = 60/94 (63%)
 Frame = +3

Query: 57  FPEKITPTPNFPEKTTISPDPTSKTHVLDTLLSHKSNPKSALIFFEAVQRKRGFVKTVDV 236
           + +   PT    ++TT    P S+ HV+D LL H ++P+SAL +F+  + +RGF++ VD 
Sbjct: 41  YSQDTVPTSQIHQETT----PLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDA 96

Query: 237 FCLLLQILSSSPKTHVAVRYLLNNYAFGDSGPSP 338
           +C+LL IL  SP+TH   R LLN Y  GDS PSP
Sbjct: 97  YCVLLHILMRSPETHGHARKLLNRYVSGDSDPSP 130


>ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|222855585|gb|EEE93132.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = +3

Query: 30  PPLPTATDHFPEKITPTPNFPEKTTISPDPT--SKTHVLDTLLSHKSNPKSALIFFEAVQ 203
           P +P +     +   P  NFP K+  +   +  ++T  +DTLL+H+++P+SAL +F    
Sbjct: 30  PNIPISETPLSQNPHPNTNFPGKSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWAS 89

Query: 204 RKRGFVKTVDVFCLLLQILSSSPKTHVAVRYLLNNYAFGDSGPSP 338
           +KRG +K+VD  C+LL IL+ S +T    R LLN +A  D GP P
Sbjct: 90  QKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVP 134