BLASTX nr result

ID: Glycyrrhiza23_contig00032984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032984
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...   171   6e-41
ref|NP_174061.1| DNA repair metallo-beta-lactamase family protei...   162   3e-38
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...   160   8e-38
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   160   1e-37
ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35

>ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 437

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/112 (74%), Positives = 97/112 (86%)
 Frame = -1

Query: 341 GINTLGKEDLLLQISRVLKIKIWVWPERLQTMHLLGLPDIFTTDTSLTRVRAVPQYSFSV 162
           GINTLGKEDLL++ISR L+I IWVWP+RL+TMHLLG  DIFTT+TSLTRVRAVP YSFS+
Sbjct: 178 GINTLGKEDLLVEISRALQIMIWVWPQRLRTMHLLGYDDIFTTNTSLTRVRAVPVYSFSI 237

Query: 161 ETLEALNTMRPTIGIMPSGLPWVKKSLQKNGLLSGSFLTSSYKRGRWSGDSE 6
            T+E LN + PTIGIMPSGLPW+KKS QKN L +GSFLTS YKRG+ S ++E
Sbjct: 238 NTVEELNYVCPTIGIMPSGLPWIKKSHQKNELQTGSFLTSRYKRGKLSANTE 289


>ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
           thaliana] gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20
           [Arabidopsis thaliana] gi|17473671|gb|AAL38292.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis
           thaliana] gi|332192705|gb|AEE30826.1| DNA repair
           metallo-beta-lactamase family protein [Arabidopsis
           thaliana]
          Length = 422

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)
 Frame = -1

Query: 338 INTLGKEDLLLQISRVLKIKIWVWPERLQTMHLLGLPDIFTTDTSLTRVRAVPQYSFSVE 159
           +++LGKEDLL+ +SR+L IKIWVWPERL+TMHLLG  DIFTTDTSLTRVRAVP+YSFS++
Sbjct: 182 VDSLGKEDLLVHVSRILNIKIWVWPERLRTMHLLGFQDIFTTDTSLTRVRAVPRYSFSIQ 241

Query: 158 TLEALNTMRPTIGIMPSGLPWVKKSLQKNGLLSGSFLTSSYKRGRWSGDSE 6
           TLE LNTM PTIGIMPSGLPWVK+  + +  LSGSFLT+S K    S   E
Sbjct: 242 TLEGLNTMCPTIGIMPSGLPWVKRPFKGDDKLSGSFLTASMKNETVSAKKE 292


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/111 (70%), Positives = 91/111 (81%)
 Frame = -1

Query: 338 INTLGKEDLLLQISRVLKIKIWVWPERLQTMHLLGLPDIFTTDTSLTRVRAVPQYSFSVE 159
           +++LGKE+LLL +SRVL IKIWVWPERL+TMHLLG  D+FTTDTSLTRVRAVP+YSFS++
Sbjct: 182 VDSLGKEELLLHVSRVLNIKIWVWPERLRTMHLLGFQDVFTTDTSLTRVRAVPRYSFSIQ 241

Query: 158 TLEALNTMRPTIGIMPSGLPWVKKSLQKNGLLSGSFLTSSYKRGRWSGDSE 6
           TLE LNTM PTIGIMPSGLPWVK   + +  LSGSFLT+S K    S   E
Sbjct: 242 TLEGLNTMCPTIGIMPSGLPWVKTPFKGDDKLSGSFLTASMKNETISAQKE 292


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/110 (72%), Positives = 89/110 (80%)
 Frame = -1

Query: 341 GINTLGKEDLLLQISRVLKIKIWVWPERLQTMHLLGLPDIFTTDTSLTRVRAVPQYSFSV 162
           GI++LGKEDLLL ISR+L IKIWVWPERLQTMHLLG  DIFTT TS TRVRAVP+YSFS+
Sbjct: 183 GIDSLGKEDLLLHISRMLNIKIWVWPERLQTMHLLGFHDIFTTKTSQTRVRAVPRYSFSI 242

Query: 161 ETLEALNTMRPTIGIMPSGLPWVKKSLQKNGLLSGSFLTSSYKRGRWSGD 12
            TLE LN M PTIGIMPSGLPWV K  + +  L GSFLTS YK G+ S +
Sbjct: 243 NTLEELNKMHPTIGIMPSGLPWVVKPTKGDDNLFGSFLTSRYKNGKLSAN 292


>ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|222832669|gb|EEE71146.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  152 bits (384), Expect = 3e-35
 Identities = 77/104 (74%), Positives = 85/104 (81%)
 Frame = -1

Query: 341 GINTLGKEDLLLQISRVLKIKIWVWPERLQTMHLLGLPDIFTTDTSLTRVRAVPQYSFSV 162
           GI+TLGKE+LL+ ISRVL IKIW+W ERLQTMHLLG  D FTT  SLTRVRAVP YS SV
Sbjct: 176 GIDTLGKEELLIHISRVLNIKIWLWLERLQTMHLLGFHDTFTTKNSLTRVRAVPCYSLSV 235

Query: 161 ETLEALNTMRPTIGIMPSGLPWVKKSLQKNGLLSGSFLTSSYKR 30
           ETLE LNTMRPTIGIMPSGLPWV K ++ +  L GS LTS YK+
Sbjct: 236 ETLEGLNTMRPTIGIMPSGLPWVLKPVKGDDNLFGSLLTSRYKK 279


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