BLASTX nr result

ID: Glycyrrhiza23_contig00032979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032979
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535827.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   185   3e-45
ref|XP_003543071.1| PREDICTED: 3-hydroxypropionyl-coenzyme A deh...   171   4e-41
ref|XP_003593565.1| Fatty acid oxidation complex subunit alpha [...   167   8e-40
ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   155   2e-36
ref|XP_002315715.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35

>ref|XP_003535827.1| PREDICTED: carnitinyl-CoA dehydratase-like [Glycine max]
          Length = 249

 Score =  185 bits (470), Expect = 3e-45
 Identities = 100/126 (79%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
 Frame = -2

Query: 376 MFDSLRPVVAALFSLPIPTVAAVSGHAVA-GLILAMAHDYVLMRSDRGVLYMPEVDLGIT 200
           M D+LRPV+AAL SLPIPTVAAVSGHA A G I A+AHDYVLMR+DRGV+Y PEVDLGIT
Sbjct: 94  MSDALRPVLAALLSLPIPTVAAVSGHAAAAGAIFALAHDYVLMRADRGVIYFPEVDLGIT 153

Query: 199 LPDCFAAVARAKIRPAKAVRDVLLSGVKVRAKEAVEMGIVHKAHDSAEETVEAAMRLGEE 20
           LP+ FAAVA AKI PA A+RDV+L+G KVRA+ AVEMGIVH AHDSAE TVEAAMRLGEE
Sbjct: 154 LPEYFAAVAGAKI-PAAALRDVVLAGRKVRAEGAVEMGIVHSAHDSAEGTVEAAMRLGEE 212

Query: 19  LAGRKW 2
           LA RKW
Sbjct: 213 LARRKW 218


>ref|XP_003543071.1| PREDICTED: 3-hydroxypropionyl-coenzyme A dehydratase-like [Glycine
           max]
          Length = 241

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/126 (68%), Positives = 103/126 (81%), Gaps = 1/126 (0%)
 Frame = -2

Query: 376 MFDSLRPVVAALFSLPIPTVAAVSGHA-VAGLILAMAHDYVLMRSDRGVLYMPEVDLGIT 200
           M DSL+PV+AA+ SLP+PT+ A++GHA  AG +LA++HDYVLMRSDRGVLYMPEVDLG+ 
Sbjct: 85  MVDSLKPVLAAIMSLPMPTIVAINGHASAAGFLLAVSHDYVLMRSDRGVLYMPEVDLGLP 144

Query: 199 LPDCFAAVARAKIRPAKAVRDVLLSGVKVRAKEAVEMGIVHKAHDSAEETVEAAMRLGEE 20
           LP  FAAV R+KIR    +RD++L G K+ A EAV MGIV  AHDSAE TVEAAMRLGE+
Sbjct: 145 LPGYFAAVIRSKIRSPAVMRDLVLGGAKLTAAEAVRMGIVDSAHDSAESTVEAAMRLGEQ 204

Query: 19  LAGRKW 2
           LA RKW
Sbjct: 205 LARRKW 210


>ref|XP_003593565.1| Fatty acid oxidation complex subunit alpha [Medicago truncatula]
           gi|355482613|gb|AES63816.1| Fatty acid oxidation complex
           subunit alpha [Medicago truncatula]
          Length = 239

 Score =  167 bits (423), Expect = 8e-40
 Identities = 84/126 (66%), Positives = 101/126 (80%), Gaps = 1/126 (0%)
 Frame = -2

Query: 376 MFDSLRPVVAALFSLPIPTVAAVSGHA-VAGLILAMAHDYVLMRSDRGVLYMPEVDLGIT 200
           M  SL+PV AAL SLP+PT+AA++GHA  AG +LA+ HDYVLMRSD+GVLYMPEV+LG+ 
Sbjct: 83  MVQSLKPVAAALMSLPMPTIAAINGHASAAGFLLAICHDYVLMRSDQGVLYMPEVNLGLP 142

Query: 199 LPDCFAAVARAKIRPAKAVRDVLLSGVKVRAKEAVEMGIVHKAHDSAEETVEAAMRLGEE 20
           LPD FAAV   KI+    +RDVLL GVK++ KEAV++GIV  AHDS E TVEAA+RLGEE
Sbjct: 143 LPDYFAAVFGEKIKSPVVLRDVLLGGVKIKGKEAVKLGIVDSAHDSVESTVEAALRLGEE 202

Query: 19  LAGRKW 2
            A RKW
Sbjct: 203 FAKRKW 208


>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/126 (61%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
 Frame = -2

Query: 376 MFDSLRPVVAALFSLPIPTVAAVSGHAVA-GLILAMAHDYVLMRSDRGVLYMPEVDLGIT 200
           + D  +P+VA L SLP+PT+AAVSGHA A G +LA++HDYVLM++DR VLYM E+D+G+T
Sbjct: 81  LLDCFKPIVADLLSLPMPTIAAVSGHAAAAGFMLAISHDYVLMKNDRSVLYMSELDIGLT 140

Query: 199 LPDCFAAVARAKIRPAKAVRDVLLSGVKVRAKEAVEMGIVHKAHDSAEETVEAAMRLGEE 20
            PD F A+ ++KI    A RDV+L   KV+A+EAV MGIV  AHDSAE TVEAA+RL E+
Sbjct: 141 FPDYFMAMMKSKISDPAARRDVMLRAKKVKAEEAVRMGIVDSAHDSAESTVEAAVRLAEQ 200

Query: 19  LAGRKW 2
           L+GRKW
Sbjct: 201 LSGRKW 206


>ref|XP_002315715.1| predicted protein [Populus trichocarpa] gi|222864755|gb|EEF01886.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  153 bits (386), Expect = 2e-35
 Identities = 77/126 (61%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
 Frame = -2

Query: 376 MFDSLRPVVAALFSLPIPTVAAVSGHAVA-GLILAMAHDYVLMRSDRGVLYMPEVDLGIT 200
           M + L+PVVA L SLP+PT+AAV+GHA A GLILA++HDY+ M+ DRGVLYM EVD+G+T
Sbjct: 83  MVELLKPVVAELISLPMPTIAAVNGHAAAAGLILALSHDYIHMKRDRGVLYMSEVDIGLT 142

Query: 199 LPDCFAAVARAKIRPAKAVRDVLLSGVKVRAKEAVEMGIVHKAHDSAEETVEAAMRLGEE 20
            PD F A+ RAK+     +RDVLL G KV+  EAV  GIV  AHD+ E   EA MRLGE+
Sbjct: 143 FPDYFTALFRAKVGSPSVLRDVLLRGAKVKGDEAVRRGIVEAAHDNEERLSEATMRLGEQ 202

Query: 19  LAGRKW 2
           LA RKW
Sbjct: 203 LASRKW 208


Top