BLASTX nr result

ID: Glycyrrhiza23_contig00032965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032965
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   130   1e-28
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   122   4e-26

>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/95 (76%), Positives = 76/95 (80%)
 Frame = +2

Query: 2   ANMYAAAGCWSKLAQVRTYMRDLGVRKGPGCAWVDVGSEFSPFLVGDTSNPHASEIYPLM 181
           ANMYAAAG W KLA+VRTYMR+LGVRK PGCAWVDVGSEFSPFLVGD+SNPHASEIYPLM
Sbjct: 629 ANMYAAAGSWRKLAEVRTYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLM 688

Query: 182 DGLNELMKDAGYVRXXXXXXXXXXXXXMNSVGNVY 286
           DGLNELMKDAGYVR             MN  GN Y
Sbjct: 689 DGLNELMKDAGYVRSEELVSSEEDFEEMNIAGNAY 723


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/73 (80%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   ANMYAAAGCWSKLAQVRTYMRDLGVRKGPGCAWVDVGSEFSPFLVGDTSNPHASEIYPLM 181
           ANMYAAAGCWSKLA+VRTYMRDLGVRK PGCAWVDVGS F PFLV DTS PH +++YPL+
Sbjct: 642 ANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLL 701

Query: 182 DGLNELMKDAGYV 220
           +GL ELMKDA YV
Sbjct: 702 EGLTELMKDAEYV 714


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   ANMYAAAGCWSKLAQVRTYMRDLGVRKGPGCAWVDVGSEFSPFLVGDTSNPHASEIYPLM 181
           ANMYAAAGCW+KLA+VR +MRDLGVRK PGCAWVDVG+ FSPFLV DTSN +A EIYPL+
Sbjct: 604 ANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLL 663

Query: 182 DGLNELMKDAGYV 220
           +GL  +MK+AGY+
Sbjct: 664 EGLTMVMKEAGYI 676


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   ANMYAAAGCWSKLAQVRTYMRDLGVRKGPGCAWVDVGSEFSPFLVGDTSNPHASEIYPLM 181
           ANMYAAAGCW+KLA+VR +MRDLGVRK PGCAWVDVG+ FSPFLV DTSN +A EIYPL+
Sbjct: 649 ANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLL 708

Query: 182 DGLNELMKDAGYV 220
           +GL  +MK+AGY+
Sbjct: 709 EGLTMVMKEAGYI 721


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/73 (73%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   ANMYAAAGCWSKLAQVRTYMRDLGVRKGPGCAWVDVGSEFSPFLVGDTSNPHASEIYPLM 181
           ANMYAAAGCW+KLA+VR +MRDLGVRK PGCAWVDVG+ FSPFLV DTSN +A EIYPL+
Sbjct: 723 ANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLL 782

Query: 182 DGLNELMKDAGYV 220
           +GL  ++K+AGY+
Sbjct: 783 EGLTMVIKEAGYI 795


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