BLASTX nr result

ID: Glycyrrhiza23_contig00032938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032938
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like ...   121   7e-26
ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   117   7e-25
emb|CBI28838.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...   110   2e-22
ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   103   1e-20

>ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like [Glycine max]
          Length = 668

 Score =  121 bits (303), Expect = 7e-26
 Identities = 65/93 (69%), Positives = 70/93 (75%)
 Frame = -2

Query: 280 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXRKNLTVS 101
           MAETLSPNPTM QKQRL    RI SPTSPF LGSNDD+LE             RK+L ++
Sbjct: 1   MAETLSPNPTMDQKQRL----RILSPTSPFILGSNDDKLERAQARDARATAIRRKSLALN 56

Query: 100 QSLQANSDPCLNKQQILDLFQNCIKLASENKIN 2
           Q LQ NSDPCLNKQQI+DLFQNCIKLASENKIN
Sbjct: 57  QPLQPNSDPCLNKQQIIDLFQNCIKLASENKIN 89


>ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 680

 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/93 (69%), Positives = 70/93 (75%)
 Frame = -2

Query: 280 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXRKNLTVS 101
           MAETLSPNP MG+KQRL    RIQSPTSPF LGSN+DQLE             RK+L ++
Sbjct: 1   MAETLSPNPAMGRKQRL----RIQSPTSPFVLGSNNDQLERARARDARAAANRRKSLALN 56

Query: 100 QSLQANSDPCLNKQQILDLFQNCIKLASENKIN 2
           Q LQANS P LNKQQILDLFQNCIKLASENKIN
Sbjct: 57  QPLQANSHPGLNKQQILDLFQNCIKLASENKIN 89


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/93 (62%), Positives = 65/93 (69%)
 Frame = -2

Query: 280 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXRKNLTVS 101
           MAETLSPNP   QKQR  ++ARIQSPTSPFFLGSNDDQLE             RK++   
Sbjct: 1   MAETLSPNPATVQKQRALMSARIQSPTSPFFLGSNDDQLERAQARAARAASIRRKSVAAH 60

Query: 100 QSLQANSDPCLNKQQILDLFQNCIKLASENKIN 2
                + DPCL K+QIL+LFQNCIKLASENKIN
Sbjct: 61  APPPPDPDPCLGKEQILELFQNCIKLASENKIN 93


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/93 (62%), Positives = 65/93 (69%)
 Frame = -2

Query: 280 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXRKNLTVS 101
           MAETLSPNP   QKQR  ++ARIQSPTSPFFLGSNDDQLE             RK++   
Sbjct: 1   MAETLSPNPATVQKQRALMSARIQSPTSPFFLGSNDDQLERAQARAARAASIRRKSVAAH 60

Query: 100 QSLQANSDPCLNKQQILDLFQNCIKLASENKIN 2
                + DPCL K+QIL+LFQNCIKLASENKIN
Sbjct: 61  APPPPDPDPCLGKEQILELFQNCIKLASENKIN 93


>ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 685

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/94 (59%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = -2

Query: 280 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXRKNLTVS 101
           MAE L PNPT   K+ +P++ARIQSPTSPFF+GSN+DQLE             RK L  +
Sbjct: 1   MAEALGPNPTTDHKKTVPMSARIQSPTSPFFVGSNNDQLERAQTREARAAAIRRKPLAAN 60

Query: 100 QSLQ-ANSDPCLNKQQILDLFQNCIKLASENKIN 2
              Q ++S PCLNK QILDLF NCIKLASENKIN
Sbjct: 61  FHPQPSHSHPCLNKHQILDLFHNCIKLASENKIN 94


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