BLASTX nr result

ID: Glycyrrhiza23_contig00032936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032936
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593267.1| Sentrin-specific protease [Medicago truncatu...   136   2e-30
gb|ABD28539.2| Peptidase C48, SUMO/Sentrin/Ubl1, putative [Medic...   136   2e-30
ref|XP_003545727.1| PREDICTED: probable ubiquitin-like-specific ...   114   1e-23
ref|XP_003543139.1| PREDICTED: probable ubiquitin-like-specific ...    76   3e-12

>ref|XP_003593267.1| Sentrin-specific protease [Medicago truncatula]
           gi|355482315|gb|AES63518.1| Sentrin-specific protease
           [Medicago truncatula]
          Length = 991

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/97 (69%), Positives = 73/97 (75%)
 Frame = -2

Query: 293 PPADCRDKGPLSEVPGIIKHKVEADSPGDCCYPAMWHGNPFNSSTELRDDIQFPTVISPI 114
           PP DCR KGPLSE+PG+I+HKVEADS G  CYP +WHGN  N STE   DIQF  V SP+
Sbjct: 678 PPIDCRGKGPLSELPGVIEHKVEADSSGASCYPGIWHGNLSNGSTE--TDIQFRPV-SPV 734

Query: 113 RVASCLREPGIVFKDLQAAVVTSHSDCLQMSACHLRG 3
           R ASC R+PGIVFKDLQAAVV  H DC QMS CH  G
Sbjct: 735 RAASCSRDPGIVFKDLQAAVVPPHFDCRQMSLCHQSG 771


>gb|ABD28539.2| Peptidase C48, SUMO/Sentrin/Ubl1, putative [Medicago truncatula]
          Length = 238

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/97 (69%), Positives = 73/97 (75%)
 Frame = -2

Query: 293 PPADCRDKGPLSEVPGIIKHKVEADSPGDCCYPAMWHGNPFNSSTELRDDIQFPTVISPI 114
           PP DCR KGPLSE+PG+I+HKVEADS G  CYP +WHGN  N STE   DIQF  V SP+
Sbjct: 133 PPIDCRGKGPLSELPGVIEHKVEADSSGASCYPGIWHGNLSNGSTE--TDIQFRPV-SPV 189

Query: 113 RVASCLREPGIVFKDLQAAVVTSHSDCLQMSACHLRG 3
           R ASC R+PGIVFKDLQAAVV  H DC QMS CH  G
Sbjct: 190 RAASCSRDPGIVFKDLQAAVVPPHFDCRQMSLCHQSG 226


>ref|XP_003545727.1| PREDICTED: probable ubiquitin-like-specific protease 2B-like
           [Glycine max]
          Length = 336

 Score =  114 bits (284), Expect = 1e-23
 Identities = 67/100 (67%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = -2

Query: 293 PPADCRDKGPLSEVPGIIKH-KVEADSPGDCCYPAMWHG-NPFNSSTELRD-DIQFPTVI 123
           PP DC DKG  SE P II + KVE DS   C YPA+WHG NP NSSTEL   DIQ+PT  
Sbjct: 42  PPTDCLDKGHPSEDPSIIVNPKVEEDSLRGC-YPALWHGKNPSNSSTELETTDIQYPTA- 99

Query: 122 SPIRVASCLREPGIVFKDLQAAVVTSHSDCLQMSACHLRG 3
           S IRV  CL   G+V KDLQAAVVTSHSDCLQM ACH RG
Sbjct: 100 SHIRVPICLTGSGLVSKDLQAAVVTSHSDCLQMPACHQRG 139


>ref|XP_003543139.1| PREDICTED: probable ubiquitin-like-specific protease 2B-like
           [Glycine max]
          Length = 584

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/98 (50%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
 Frame = -2

Query: 293 PPADCRDKGPLSEVPGIIKH-KVEADSPGDCCYPAMWHGNPFNSSTELRDDIQFPTVISP 117
           P  DC DK  L E P II + K+E DS   CCYP                        SP
Sbjct: 303 PHTDCLDKDLLLEDPAIIVNPKLEEDSLRGCCYPTA----------------------SP 340

Query: 116 IRVASCLREPGIVFKDLQAAVVTSHSDCLQMSACHLRG 3
           IRVASCL  PG+V KDL  AVVTS S CLQMSACH RG
Sbjct: 341 IRVASCLTGPGLVSKDL-VAVVTSRSACLQMSACHQRG 377


Top