BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032883
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546864.1| PREDICTED: DNA-directed RNA polymerases I, I...   142   3e-32
ref|XP_003531419.1| PREDICTED: DNA-directed RNA polymerases I, I...   141   6e-32
gb|AFK47081.1| unknown [Lotus japonicus]                              135   3e-30
ref|XP_003610520.1| DNA-directed RNA polymerases I, II, and III ...   120   9e-26
ref|XP_003620791.1| DNA-directed RNA polymerases I, II, and III ...   111   7e-23

>ref|XP_003546864.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Glycine max]
          Length = 145

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = -2

Query: 235 MSELLFDDIFKVENIDPDGKKYDKVSRIVAQSEKCDMYMLLDVNTEIYPMKKNERFLMAL 56
           MSELLF+DIFKVE +DPDGKKYDKVSRIVA+SEKCDMYMLLD+NTEIYPM + ERFLMAL
Sbjct: 1   MSELLFNDIFKVEKVDPDGKKYDKVSRIVARSEKCDMYMLLDINTEIYPMGEKERFLMAL 60

Query: 55  SPSLVLNTKEGSVSIQDK 2
           SPSLVLNTK+GSVSIQDK
Sbjct: 61  SPSLVLNTKDGSVSIQDK 78


>ref|XP_003531419.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Glycine max]
          Length = 160

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = -2

Query: 235 MSELLFDDIFKVENIDPDGKKYDKVSRIVAQSEKCDMYMLLDVNTEIYPMKKNERFLMAL 56
           MSELLFDDIFKVE +DPDGKKYDKVSRIVA+SEKCDM MLLDVNTEIYPM + ERFLMAL
Sbjct: 1   MSELLFDDIFKVEKVDPDGKKYDKVSRIVARSEKCDMNMLLDVNTEIYPMGEKERFLMAL 60

Query: 55  SPSLVLNTKEGSVSIQDK 2
           SPSLVLNTK+GSVSIQDK
Sbjct: 61  SPSLVLNTKDGSVSIQDK 78


>gb|AFK47081.1| unknown [Lotus japonicus]
          Length = 138

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/78 (84%), Positives = 73/78 (93%)
 Frame = -2

Query: 235 MSELLFDDIFKVENIDPDGKKYDKVSRIVAQSEKCDMYMLLDVNTEIYPMKKNERFLMAL 56
           MSE+ FDDIFKVEN+DPDGKKYDKVSRI A+SEK DMYMLLDVNTEIYPMK+NE+FLMAL
Sbjct: 1   MSEIFFDDIFKVENLDPDGKKYDKVSRIEARSEKRDMYMLLDVNTEIYPMKENEKFLMAL 60

Query: 55  SPSLVLNTKEGSVSIQDK 2
           SPSLVLNTK+GSV I +K
Sbjct: 61  SPSLVLNTKDGSVPIHEK 78


>ref|XP_003610520.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3
           [Medicago truncatula] gi|355511575|gb|AES92717.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Medicago truncatula]
          Length = 140

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/78 (74%), Positives = 71/78 (91%)
 Frame = -2

Query: 235 MSELLFDDIFKVENIDPDGKKYDKVSRIVAQSEKCDMYMLLDVNTEIYPMKKNERFLMAL 56
           MSELLFDD FK+ +++P+G+KYDKVSRIVA+SEK  M+MLLDVNTEIYPM + E+FL+AL
Sbjct: 1   MSELLFDDFFKIVDVNPNGEKYDKVSRIVARSEKHGMHMLLDVNTEIYPMDRKEKFLLAL 60

Query: 55  SPSLVLNTKEGSVSIQDK 2
           SPSLVLNTK+G VSIQ+K
Sbjct: 61  SPSLVLNTKDGPVSIQEK 78


>ref|XP_003620791.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3
           [Medicago truncatula] gi|355495806|gb|AES77009.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Medicago truncatula]
          Length = 134

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/92 (63%), Positives = 71/92 (77%), Gaps = 14/92 (15%)
 Frame = -2

Query: 235 MSELLFDDIFKVENIDPDGKKYDK--------------VSRIVAQSEKCDMYMLLDVNTE 98
           MSELLFDD FK+ +++P+G+KYDK              VSRIVA+SEK  M+MLLDVNTE
Sbjct: 1   MSELLFDDFFKIVDVNPNGEKYDKAPRVLKVASTEIVDVSRIVARSEKHGMHMLLDVNTE 60

Query: 97  IYPMKKNERFLMALSPSLVLNTKEGSVSIQDK 2
           IYPM + E+FL+ALSPSLVLNTK+G VSIQ+K
Sbjct: 61  IYPMDRKEKFLLALSPSLVLNTKDGPVSIQEK 92