BLASTX nr result

ID: Glycyrrhiza23_contig00032873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032873
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597643.1| 23S rRNA (uracil-5-)-methyltransferase rumA ...   417   e-115
ref|XP_003542081.1| PREDICTED: uncharacterized RNA methyltransfe...   402   e-110
emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]   372   e-101
ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransfe...   372   e-101
ref|XP_004141670.1| PREDICTED: uncharacterized RNA methyltransfe...   356   2e-96

>ref|XP_003597643.1| 23S rRNA (uracil-5-)-methyltransferase rumA [Medicago truncatula]
           gi|355486691|gb|AES67894.1| 23S rRNA
           (uracil-5-)-methyltransferase rumA [Medicago truncatula]
          Length = 560

 Score =  417 bits (1073), Expect = e-115
 Identities = 194/231 (83%), Positives = 212/231 (91%), Gaps = 3/231 (1%)
 Frame = -2

Query: 684 SNPKTPTPN---SYYPKRGQTLELVCESLAFKGKGLCKVTETGFVVMCDRALPGERFIGR 514
           S PKTP PN   SY+PKRGQTLEL+CESLAFKGKGLCKVT+TGFVVMCDRALPGERFIGR
Sbjct: 56  SIPKTPNPNTSTSYFPKRGQTLELLCESLAFKGKGLCKVTDTGFVVMCDRALPGERFIGR 115

Query: 513 VTRKKGNYAEATKVKTLTPPRDIVDAPCVYAPNCGGCKLQNLSYEAQLRAKEDQVRDLIV 334
           +TRKKGNYAEATKV+TLTPP  +VDAPCVY P+CGGCK QNL+Y AQ+ AKE+QVRDL++
Sbjct: 116 ITRKKGNYAEATKVETLTPPFHVVDAPCVYVPHCGGCKTQNLAYLAQVNAKEEQVRDLVI 175

Query: 333 HVGRFSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPKESLHERNVVDGSENYA 154
           HVGRFS KELELHGIMKPIVPCDIQF YRNKMEFSFGP KWLPKESLHERNV  GSENY+
Sbjct: 176 HVGRFSQKELELHGIMKPIVPCDIQFHYRNKMEFSFGPYKWLPKESLHERNVDAGSENYS 235

Query: 153 LGLHAPGFFDKILNIDKCLLQSDPADKVLAAIQECWRDPQLGLSPYNTHSH 1
           LGLH PGFFDKI+N++KCLLQ+DPA+KVLAAIQECWRDPQLG SPYN HSH
Sbjct: 236 LGLHVPGFFDKIINVEKCLLQTDPANKVLAAIQECWRDPQLGFSPYNVHSH 286


>ref|XP_003542081.1| PREDICTED: uncharacterized RNA methyltransferase CT0009-like
           [Glycine max]
          Length = 533

 Score =  402 bits (1033), Expect = e-110
 Identities = 187/224 (83%), Positives = 205/224 (91%), Gaps = 1/224 (0%)
 Frame = -2

Query: 669 PTPNSYYPKRGQTLELVCESLAFKGKGLCKVTETGFVVMCDRALPGERFIGRVTRKKGNY 490
           PTPNSY+PKRGQTLELVCESLAFKGKGLCKVT+TGFVV+CDRALPGE FIGRVTRKKGNY
Sbjct: 36  PTPNSYFPKRGQTLELVCESLAFKGKGLCKVTQTGFVVLCDRALPGEHFIGRVTRKKGNY 95

Query: 489 AEATKVKTLTPPRDIVDAPCVYAPNCGGCKLQNLSYEAQLRAKEDQVRDLIVHVGRFSSK 310
           AE TKVKT+TPPRDIVDAPCVYAP CGGCK QNLSYEAQLRAKE+QVRDL++HVG+FS +
Sbjct: 96  AEVTKVKTITPPRDIVDAPCVYAPYCGGCKTQNLSYEAQLRAKEEQVRDLLIHVGKFSLQ 155

Query: 309 ELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPKESLHERNVVDG-SENYALGLHAPG 133
            L+LH ++KPIVPC IQF YRNKMEFSFGP +WLPKESL +R V D  +ENYALGLHAPG
Sbjct: 156 HLQLHAVLKPIVPCRIQFHYRNKMEFSFGPQRWLPKESLQDRIVDDDTNENYALGLHAPG 215

Query: 132 FFDKILNIDKCLLQSDPADKVLAAIQECWRDPQLGLSPYNTHSH 1
           FFDKILN+D CLLQS PA+KVLAA+QECWRDPQLG SPYN HSH
Sbjct: 216 FFDKILNVDNCLLQSHPANKVLAAVQECWRDPQLGFSPYNVHSH 259


>emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]
          Length = 1255

 Score =  372 bits (955), Expect = e-101
 Identities = 174/227 (76%), Positives = 197/227 (86%)
 Frame = -2

Query: 681 NPKTPTPNSYYPKRGQTLELVCESLAFKGKGLCKVTETGFVVMCDRALPGERFIGRVTRK 502
           +PK P   SY+PKRGQTLELVCESLAFKGKGLCKV +TGFVV+CDRALPGERF+GRVTRK
Sbjct: 45  SPK-PKTQSYFPKRGQTLELVCESLAFKGKGLCKVADTGFVVLCDRALPGERFVGRVTRK 103

Query: 501 KGNYAEATKVKTLTPPRDIVDAPCVYAPNCGGCKLQNLSYEAQLRAKEDQVRDLIVHVGR 322
           KGNYAE TKV+T++P  DIVDAPC YA NCGGCK QNLSYEAQ+RAKE QV++L++HVG+
Sbjct: 104 KGNYAEVTKVETISPHWDIVDAPCEYASNCGGCKTQNLSYEAQVRAKEQQVQELVIHVGK 163

Query: 321 FSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPKESLHERNVVDGSENYALGLH 142
           FS K+ E   IMKPIVPCDIQF YRNKMEFSF   KWLP+E LHE+   DG+  YALGLH
Sbjct: 164 FSDKDPEFSSIMKPIVPCDIQFHYRNKMEFSFATQKWLPRELLHEKE--DGASGYALGLH 221

Query: 141 APGFFDKILNIDKCLLQSDPADKVLAAIQECWRDPQLGLSPYNTHSH 1
           APGFFDK+LN++KCLLQS+PA+ VLAAIQECWRDPQ GLSPYN HSH
Sbjct: 222 APGFFDKVLNVNKCLLQSEPANMVLAAIQECWRDPQFGLSPYNVHSH 268


>ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransferase CT0009 [Vitis
           vinifera] gi|297743126|emb|CBI35993.3| unnamed protein
           product [Vitis vinifera]
          Length = 570

 Score =  372 bits (954), Expect = e-101
 Identities = 173/227 (76%), Positives = 197/227 (86%)
 Frame = -2

Query: 681 NPKTPTPNSYYPKRGQTLELVCESLAFKGKGLCKVTETGFVVMCDRALPGERFIGRVTRK 502
           +PK P   SY+PKRGQTLELVCESLAFKGKGLCKV +TGFVV+CDRALPGERF+GRVTRK
Sbjct: 73  SPK-PKTQSYFPKRGQTLELVCESLAFKGKGLCKVADTGFVVLCDRALPGERFVGRVTRK 131

Query: 501 KGNYAEATKVKTLTPPRDIVDAPCVYAPNCGGCKLQNLSYEAQLRAKEDQVRDLIVHVGR 322
           KGNYAE TKV+T++P  DIVDAPC YA NCGGCK QNLSYEAQ+RAKE QV++L++HVG+
Sbjct: 132 KGNYAEVTKVETISPHWDIVDAPCEYASNCGGCKTQNLSYEAQVRAKEQQVQELVIHVGK 191

Query: 321 FSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPKESLHERNVVDGSENYALGLH 142
           FS K+ E   IMKPIVPCD+QF YRNKMEFSF   KWLP+E LHE+   DG+  YALGLH
Sbjct: 192 FSDKDPEFSSIMKPIVPCDVQFHYRNKMEFSFATQKWLPRELLHEKE--DGASGYALGLH 249

Query: 141 APGFFDKILNIDKCLLQSDPADKVLAAIQECWRDPQLGLSPYNTHSH 1
           APGFFDK+LN++KCLLQS+PA+ VLAAIQECWRDPQ GLSPYN HSH
Sbjct: 250 APGFFDKVLNVNKCLLQSEPANTVLAAIQECWRDPQFGLSPYNVHSH 296


>ref|XP_004141670.1| PREDICTED: uncharacterized RNA methyltransferase BT_0643-like
           [Cucumis sativus] gi|449480609|ref|XP_004155944.1|
           PREDICTED: uncharacterized RNA methyltransferase
           BT_0643-like [Cucumis sativus]
          Length = 562

 Score =  356 bits (914), Expect = 2e-96
 Identities = 166/228 (72%), Positives = 194/228 (85%)
 Frame = -2

Query: 684 SNPKTPTPNSYYPKRGQTLELVCESLAFKGKGLCKVTETGFVVMCDRALPGERFIGRVTR 505
           SN  +    SY+PKRGQTLELVCESLAFKGKGLCKV++TGFVVMCDR LPGERF+GRVTR
Sbjct: 56  SNGFSSKSQSYFPKRGQTLELVCESLAFKGKGLCKVSDTGFVVMCDRVLPGERFVGRVTR 115

Query: 504 KKGNYAEATKVKTLTPPRDIVDAPCVYAPNCGGCKLQNLSYEAQLRAKEDQVRDLIVHVG 325
           +KGNYAE TK++TL+P  D+VDAPC YA  CGGCK QNLSYEAQLR KE QV +L+ HVG
Sbjct: 116 RKGNYAEVTKLETLSPHWDLVDAPCEYASYCGGCKTQNLSYEAQLRYKEQQVHELLTHVG 175

Query: 324 RFSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPKESLHERNVVDGSENYALGL 145
           +FS KELE H +MKPIVPC+IQF YRNKMEFSFG  +W+PK++L E+   +G E  ALGL
Sbjct: 176 KFSQKELEFHIVMKPIVPCEIQFHYRNKMEFSFGSKRWVPKDALKEKQ--EGDEINALGL 233

Query: 144 HAPGFFDKILNIDKCLLQSDPADKVLAAIQECWRDPQLGLSPYNTHSH 1
           HAPGFFDK+LN+DKCLLQS PA++VLA++QECWRDP LGLSPY+ HSH
Sbjct: 234 HAPGFFDKVLNVDKCLLQSGPANQVLASVQECWRDPLLGLSPYDVHSH 281


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