BLASTX nr result

ID: Glycyrrhiza23_contig00032842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032842
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...    99   5e-19
ref|XP_003608293.1| FBD-associated F-box protein [Medicago trunc...    94   1e-17
ref|XP_003606067.1| FBD-associated F-box protein [Medicago trunc...    94   1e-17
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...    92   4e-17
ref|XP_003533199.1| PREDICTED: F-box protein At1g60400-like [Gly...    92   6e-17

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   KARRSERLRQ--KRDRLSDLPDAILLHIMSFVMIKDVVRTSVLSKRWRNLWKYLPDLTLH 176
           K R++++L+Q  + D LSDLPD ++LHI+SF+  K+ VRT +LS RW+N+WK +P L LH
Sbjct: 15  KLRKTKKLKQGNEEDNLSDLPDCVILHILSFLNAKEAVRTCILSNRWKNVWKCVPTLVLH 74

Query: 177 TSDFSKPWIFAEFVSGFLSRRKGNYPLHTLDFNR 278
           +SDFS    F +FVS  LS R G   L  LDF R
Sbjct: 75  SSDFSTFKNFTKFVSKILSHRDGTIALQELDFER 108


>ref|XP_003608293.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355509348|gb|AES90490.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 798

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/83 (51%), Positives = 61/83 (73%)
 Frame = +3

Query: 30  QKRDRLSDLPDAILLHIMSFVMIKDVVRTSVLSKRWRNLWKYLPDLTLHTSDFSKPWIFA 209
           + +DRL+DLPD ++LHI+SF+  K VV+TS+LS RW++LWK +P L LH+SDFS   +F+
Sbjct: 22  ENQDRLTDLPDCVILHILSFLKSKFVVQTSILSTRWKHLWKRIPTLMLHSSDFSTKKLFS 81

Query: 210 EFVSGFLSRRKGNYPLHTLDFNR 278
            FVS  L+ R  +  LH+LD  R
Sbjct: 82  VFVSQILANRDRSTALHSLDLER 104


>ref|XP_003606067.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355507122|gb|AES88264.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 790

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/83 (51%), Positives = 61/83 (73%)
 Frame = +3

Query: 30  QKRDRLSDLPDAILLHIMSFVMIKDVVRTSVLSKRWRNLWKYLPDLTLHTSDFSKPWIFA 209
           + +DRL+DLPD ++LHI+SF+  K VV+TS+LS RW++LWK +P L LH+SDFS   +F+
Sbjct: 22  ENQDRLTDLPDCVILHILSFLKSKFVVQTSILSTRWKHLWKRIPTLMLHSSDFSTKKLFS 81

Query: 210 EFVSGFLSRRKGNYPLHTLDFNR 278
            FVS  L+ R  +  LH+LD  R
Sbjct: 82  VFVSQILANRDRSTALHSLDLER 104


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/83 (56%), Positives = 57/83 (68%)
 Frame = +3

Query: 30  QKRDRLSDLPDAILLHIMSFVMIKDVVRTSVLSKRWRNLWKYLPDLTLHTSDFSKPWIFA 209
           +  DRLSDLPD I+LHI+SF+  K VVRT VLSKRWR+LWK +P L L+ S FS    FA
Sbjct: 32  ESEDRLSDLPDGIILHILSFLNTKHVVRTCVLSKRWRHLWKRIPTLMLYASRFSTVKQFA 91

Query: 210 EFVSGFLSRRKGNYPLHTLDFNR 278
            FVS  L+ R  +  LH LD +R
Sbjct: 92  MFVSNILTLRDTSTALHALDLDR 114


>ref|XP_003533199.1| PREDICTED: F-box protein At1g60400-like [Glycine max]
          Length = 392

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   KARRSERLRQK-RDRLSDLPDAILLHIMSFVMIKDVVRTSVLSKRWRNLWKYLPDLTLHT 179
           K  +S++ R++  DRLSDLPD +LLHIM F+ +K  V+T VLSKRW+ LWK L +L LH+
Sbjct: 26  KNMQSDKDREEDMDRLSDLPDFVLLHIMKFMSMKHAVQTCVLSKRWKELWKRLTNLALHS 85

Query: 180 SDFSKPWIFAEFVSGFLSRRKGNYPLHTLDFNR 278
           SDF+    F++F+S  LS R  +  LH+LD  R
Sbjct: 86  SDFADLAHFSKFLSWVLSNRDSSISLHSLDLRR 118


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