BLASTX nr result

ID: Glycyrrhiza23_contig00032829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032829
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...   167   8e-40
ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate...   165   4e-39
ref|XP_003528681.1| PREDICTED: abnormal spindle-like microcephal...   114   1e-23
emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]    97   2e-18
emb|CBI33287.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
            microcephaly-associated protein homolog [Glycine max]
          Length = 1350

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/102 (80%), Positives = 87/102 (85%)
 Frame = +3

Query: 3    RNHIVEIQRHCRGWLVKQNFLFQRDAVVKIQCVIRSLKCQKVLDCQKDAALEIQRFIRGH 182
            RNHIVEIQRHCRGWLVK++FLFQRDA VKIQC IRSLKCQK L+C KDAALEIQ FIRGH
Sbjct: 885  RNHIVEIQRHCRGWLVKRDFLFQRDAAVKIQCAIRSLKCQKALNCLKDAALEIQCFIRGH 944

Query: 183  LTRNRLLGSASKLRAVIPISCTSRPVGLSSFQLEAFMFSVVK 308
            LTRN+LLGSASK    IPISC SRP G   FQLE F+FSVVK
Sbjct: 945  LTRNQLLGSASKSYTAIPISCISRPFGFCCFQLELFLFSVVK 986



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 46/96 (47%), Positives = 52/96 (54%)
 Frame = +3

Query: 21   IQRHCRGWLVKQNFLFQRDAVVKIQCVIRSLKCQKVLDCQKDAALEIQRFIRGHLTRNRL 200
            IQ   RGW+ +      R A V  Q VI           Q+DAAL IQ +IRGHLT+N  
Sbjct: 1007 IQSCTRGWIAR------RKATVFRQHVI-----------QEDAALVIQCYIRGHLTQNWN 1049

Query: 201  LGSASKLRAVIPISCTSRPVGLSSFQLEAFMFSVVK 308
            LG  S L  VIP    SRP G  SFQLE F+ SVVK
Sbjct: 1050 LGGTSNLSEVIPAGYISRPFGCRSFQLELFLLSVVK 1085


>ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein
            [Medicago truncatula] gi|355511469|gb|AES92611.1|
            Abnormal spindle-like microcephaly-associated
            protein-like protein [Medicago truncatula]
          Length = 1503

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/102 (80%), Positives = 89/102 (87%)
 Frame = +3

Query: 3    RNHIVEIQRHCRGWLVKQNFLFQRDAVVKIQCVIRSLKCQKVLDCQKDAALEIQRFIRGH 182
            +N IVEIQRHCRGWLVK+NFLFQRDA+VKIQ V RSLKCQK L+CQKDAALEIQRFIRGH
Sbjct: 1027 KNQIVEIQRHCRGWLVKRNFLFQRDAIVKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGH 1086

Query: 183  LTRNRLLGSASKLRAVIPISCTSRPVGLSSFQLEAFMFSVVK 308
            LTRNRLLGSA +L +    SC SRP GL SFQLEAFMF+VVK
Sbjct: 1087 LTRNRLLGSALRLLSADTGSCISRPAGLCSFQLEAFMFAVVK 1128



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 49/96 (51%), Positives = 63/96 (65%)
 Frame = +3

Query: 21   IQRHCRGWLVKQNFLFQRDAVVKIQCVIRSLKCQKVLDCQKDAALEIQRFIRGHLTRNRL 200
            IQ   RGW+ +      R A+V+ Q    ++   +V +CQ+ AALE+QR+IRGHLTRN +
Sbjct: 1149 IQSCTRGWIAR------RKAIVETQ----NINVMEVRNCQEYAALELQRYIRGHLTRNLI 1198

Query: 201  LGSASKLRAVIPISCTSRPVGLSSFQLEAFMFSVVK 308
            LGSASKLRAV    C S+  G  SFQLE F+F VVK
Sbjct: 1199 LGSASKLRAV-AAGCISKRTGFCSFQLELFLFQVVK 1233


>ref|XP_003528681.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
            homolog [Glycine max]
          Length = 1351

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/60 (86%), Positives = 58/60 (96%)
 Frame = +3

Query: 27   RHCRGWLVKQNFLFQRDAVVKIQCVIRSLKCQKVLDCQKDAALEIQRFIRGHLTRNRLLG 206
            RHCRGWLVK++FLF+RDAVVKIQC I+SLKCQK L+CQKDAALEIQRFIRGHLTRN+LLG
Sbjct: 927  RHCRGWLVKRDFLFRRDAVVKIQCAIQSLKCQKALNCQKDAALEIQRFIRGHLTRNQLLG 986


>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3    RNHIVEIQRHCRGWLVKQNFLFQRDAVVKIQCVIRSLKCQKVLDCQKDAALEIQRFIRGH 182
            R+ IV IQ HCRGWL +++ L  R AV+KIQ   + +KC K   C + AA++IQRF+RG 
Sbjct: 1033 RHQIVVIQSHCRGWLTRRDLLLXRKAVIKIQNAFQCVKCWKAFQCYRYAAIDIQRFVRGX 1092

Query: 183  LTRNRLLGSASKLRAVIPISCTSRPVG--LSSFQLEAFMFSVVK 308
            +TRNRLLG+ S LR+  P  CTS+       SFQL+  + SV+K
Sbjct: 1093 ITRNRLLGT-SGLRSASPNGCTSQASRGCFPSFQLKMLLSSVLK 1135


>emb|CBI33287.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +3

Query: 21  IQRHCRGWLVKQNFLFQRDAVVKIQCVIRSLKCQKVLDCQKDAALEIQRFIRGHLTRNRL 200
           I  HCRGWL +++ L QR AV+KIQ   + +KC K   C + AA++IQRF+RGH+TRNRL
Sbjct: 267 IFNHCRGWLTRRDLLLQRKAVIKIQNAFQCVKCWKAFQCYRYAAIDIQRFVRGHITRNRL 326

Query: 201 LGSASKLRAVIPISCTSRPVG--LSSFQLEAFMFSVVK 308
           LG++S LR+  P  CT +       SFQL+  + SV+K
Sbjct: 327 LGTSS-LRSASPNGCTLQASRGCFPSFQLKMLLTSVLK 363


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