BLASTX nr result

ID: Glycyrrhiza23_contig00032820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032820
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Gl...    75   6e-12
ref|XP_002513482.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002464654.1| hypothetical protein SORBIDRAFT_01g022742 [S...    65   4e-09
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    65   6e-09
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...    65   6e-09

>ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1248

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/80 (45%), Positives = 47/80 (58%)
 Frame = -1

Query: 309  HSKSDKRTWKIIWHLNVPQKIKVFLWKAMHGILDVRDNLARKRIVSSGRCPLCGQENETV 130
            HS S +R W  I  +  P  +KV +W      L   + L R+++V+S  CP+CG E ETV
Sbjct: 1089 HSVS-QRLWLEICSIVAPADVKVLMWSICQNALPTFEYLFRRKLVNSPLCPICGTEPETV 1147

Query: 129  EHALLFCSWTRPVRFGLQIQ 70
            EHA LFC WTRP+ FG   Q
Sbjct: 1148 EHAFLFCPWTRPLWFGSDFQ 1167


>ref|XP_002513482.1| conserved hypothetical protein [Ricinus communis]
           gi|223547390|gb|EEF48885.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 27/81 (33%), Positives = 42/81 (51%)
 Frame = -1

Query: 303 KSDKRTWKIIWHLNVPQKIKVFLWKAMHGILDVRDNLARKRIVSSGRCPLCGQENETVEH 124
           ++D   W  IW L VP K++ F+WK  H  L ++ NL  K   ++G C  CG + E +EH
Sbjct: 71  RNDNMYWISIWQLKVPPKVRAFMWKCAHNALAIKINLVHKHCGNNGLCSNCGMQEEALEH 130

Query: 123 ALLFCSWTRPVRFGLQIQCVP 61
            + FC   + + F   +   P
Sbjct: 131 LMFFCDRAKLIWFSCALSYRP 151


>ref|XP_002464654.1| hypothetical protein SORBIDRAFT_01g022742 [Sorghum bicolor]
           gi|241918508|gb|EER91652.1| hypothetical protein
           SORBIDRAFT_01g022742 [Sorghum bicolor]
          Length = 253

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
 Frame = -1

Query: 285 WKIIWHLNVPQKIKVFLWKAMHGILDVRDNLARKRIVSSGRCPLCGQENETVEHALLFCS 106
           WKI+W L +P K+KVF W+ +H  L  R  L ++ I     C +CG   E++ H LL+C+
Sbjct: 24  WKILWKLEIPPKVKVFWWRVVHEFLPARHILWKRHIEPIAFCAVCGAPEESIAHVLLYCT 83

Query: 105 WTR----PVRFGLQIQCVPHSVGFTNLAKWFVD 19
             R     VR G+ ++     +   N A W  D
Sbjct: 84  VAREFWHQVRVGIGVK-----IPSLNTASWASD 111


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = -1

Query: 300 SDKRTWKIIWHLNVPQKIKVFLWKAMHGILDVRDNLARKRIVSSGRCPLCGQENETVEHA 121
           S  R WK +W+L VP KIK+F W+A+ G++  R  LA + +  SG CP+C    E ++H 
Sbjct: 502 SRSRLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANRHVGDSGGCPVCQNGPEDIKHM 561

Query: 120 LLFCSWTRPVRFGLQIQ 70
           +  C+  + V   L ++
Sbjct: 562 IFTCARAKQVWNSLGVE 578


>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = -1

Query: 312 PHSKSDKRTWKIIWHLNVPQKIKVFLWKAMHGILDVRDNLARKRIVSSGRCPLCGQENET 133
           P+S SD   WKIIW L +P K+KVF W+ +H  L  R  L ++ I     C +CG   E+
Sbjct: 378 PNSSSDG-PWKIIWRLPIPPKVKVFWWRVIHEFLPTRHILWKRHIEPVPFCEVCGAPEES 436

Query: 132 VEHALLFCS----WTRPVRFGLQIQCVPH 58
           + H LL CS    +   VR G+ ++ +PH
Sbjct: 437 IYHVLLECSIAKEFWHQVRVGIGVK-MPH 464


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