BLASTX nr result

ID: Glycyrrhiza23_contig00032813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032813
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 ho...   173   1e-41
ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago ...   153   2e-35
gb|ABN09171.1| H+-transporting two-sector ATPase, alpha/beta sub...   153   2e-35
ref|XP_003624899.1| AAA family ATPase CDC48 subfamily [Medicago ...   142   4e-32
ref|XP_002517276.1| calmodulin-binding protein, putative [Ricinu...    94   1e-17

>ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
           [Glycine max]
          Length = 1036

 Score =  173 bits (438), Expect = 1e-41
 Identities = 94/137 (68%), Positives = 104/137 (75%)
 Frame = -1

Query: 413 NETSKKLLQTCATSWLYSRCLLLGNLFNVPMFSELCIFQVTGAKTVTDTILDCYPLIGSS 234
           +E+SK++L T A  WLYSR LLLGNL NVPM SELC FQV GAK    T  D  P  G+S
Sbjct: 295 DESSKEILLTGAKPWLYSRSLLLGNLVNVPMLSELCFFQVIGAKKQPVTKSDHCPSNGNS 354

Query: 233 NLDLEDSDTKENVNLVFTVNLETKVFLSPPSNAAVEESIQRDLSCMKLNHKVANASIRDS 54
           +L  EDSD  E+VN  FTVN ETKVFLS PSNAA EE IQRD+ C+KL HKVANAS+ D 
Sbjct: 355 DLYPEDSDIAESVNQAFTVNDETKVFLSLPSNAASEEPIQRDIPCVKLEHKVANASLHDK 414

Query: 53  ISKLGGLSKEYTLLKDI 3
           ISKLGGLSKEYTLLKDI
Sbjct: 415 ISKLGGLSKEYTLLKDI 431


>ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
           gi|355499935|gb|AES81138.1| AAA family ATPase CDC48
           subfamily [Medicago truncatula]
          Length = 1046

 Score =  153 bits (386), Expect = 2e-35
 Identities = 91/138 (65%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
 Frame = -1

Query: 413 NETSKKLLQTCATSWLYSRCLLLGNLFNVPMFSELCIFQVTGAKTVTDTILDCYPLIGSS 234
           NE+SKKLL+TCAT  LYSRCLLLGNL  V M SE  IF+V   K V+ TI D Y L GSS
Sbjct: 278 NESSKKLLETCATGLLYSRCLLLGNLVTVQMLSEFFIFRVMDIKKVSTTIYD-YSLNGSS 336

Query: 233 NLDLEDSD-TKENVNLVFTVNLETKVFLSPPSNAAVEESIQRDLSCMKLNHKVANASIRD 57
           NL+L+DS+   ENVNL FTVN ETKVFLS PSN A EESIQRDLSC+KL          D
Sbjct: 337 NLNLKDSEMAVENVNLAFTVNWETKVFLSLPSNVAFEESIQRDLSCLKL----------D 386

Query: 56  SISKLGGLSKEYTLLKDI 3
           +ISKLGGLSKE  LLK I
Sbjct: 387 NISKLGGLSKEEILLKRI 404


>gb|ABN09171.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Medicago truncatula]
          Length = 419

 Score =  153 bits (386), Expect = 2e-35
 Identities = 91/138 (65%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
 Frame = -1

Query: 413 NETSKKLLQTCATSWLYSRCLLLGNLFNVPMFSELCIFQVTGAKTVTDTILDCYPLIGSS 234
           NE+SKKLL+TCAT  LYSRCLLLGNL  V M SE  IF+V   K V+ TI D Y L GSS
Sbjct: 278 NESSKKLLETCATGLLYSRCLLLGNLVTVQMLSEFFIFRVMDIKKVSTTIYD-YSLNGSS 336

Query: 233 NLDLEDSD-TKENVNLVFTVNLETKVFLSPPSNAAVEESIQRDLSCMKLNHKVANASIRD 57
           NL+L+DS+   ENVNL FTVN ETKVFLS PSN A EESIQRDLSC+KL          D
Sbjct: 337 NLNLKDSEMAVENVNLAFTVNWETKVFLSLPSNVAFEESIQRDLSCLKL----------D 386

Query: 56  SISKLGGLSKEYTLLKDI 3
           +ISKLGGLSKE  LLK I
Sbjct: 387 NISKLGGLSKEEILLKRI 404


>ref|XP_003624899.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
           gi|355499914|gb|AES81117.1| AAA family ATPase CDC48
           subfamily [Medicago truncatula]
          Length = 963

 Score =  142 bits (357), Expect = 4e-32
 Identities = 84/137 (61%), Positives = 95/137 (69%)
 Frame = -1

Query: 413 NETSKKLLQTCATSWLYSRCLLLGNLFNVPMFSELCIFQVTGAKTVTDTILDCYPLIGSS 234
           N  SKKLL+TCATS LYSRCLL+ N   +PM SE  IFQV   K V+ TI  C PL GS+
Sbjct: 286 NGNSKKLLETCATSSLYSRCLLVRNFVTLPMLSEFFIFQVMDIKKVSATI-PC-PLNGSN 343

Query: 233 NLDLEDSDTKENVNLVFTVNLETKVFLSPPSNAAVEESIQRDLSCMKLNHKVANASIRDS 54
           N +LEDSDT E  N+ F VN ETKVFL  PSNAA EES QRDL C+KL+      S  D+
Sbjct: 344 NSNLEDSDTVEKENVAFAVNWETKVFLYLPSNAAFEESTQRDLLCLKLD------SRHDN 397

Query: 53  ISKLGGLSKEYTLLKDI 3
           ISKLGGLSKE   LKD+
Sbjct: 398 ISKLGGLSKEEMFLKDL 414


>ref|XP_002517276.1| calmodulin-binding protein, putative [Ricinus communis]
           gi|223543539|gb|EEF45069.1| calmodulin-binding protein,
           putative [Ricinus communis]
          Length = 1094

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/138 (36%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
 Frame = -1

Query: 413 NETSKKLLQTCATSWLYSRCLLLGNLFNVPMFSELCIFQVTGA-KTVTDTILDCYPLIGS 237
           +E+ K+LLQ C  SWLYSR L+ GN+  +P+ SELCIF+V  A +++ D          S
Sbjct: 298 DESVKQLLQACVVSWLYSRILICGNIVAIPILSELCIFRVVSANQSLEDNQNQDLIKERS 357

Query: 236 SNLDLEDSDTKENVNLVFTVNLETKVFLSPPSNAAVEESIQRDLSCMKLNHKVANASIRD 57
           +++  + S++ +++    ++N ETKV+L  P N+A +   +  LS  ++ +    + +  
Sbjct: 358 NSVCPQSSESMDHLKETISINHETKVYLHLPMNSACKTPYRSSLSFTQIENVHVKSVMAH 417

Query: 56  SISKLGGLSKEYTLLKDI 3
            I+KLGGL KEY +LKDI
Sbjct: 418 EITKLGGLHKEYAVLKDI 435


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