BLASTX nr result

ID: Glycyrrhiza23_contig00032810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032810
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611208.1| Ileal sodium/bile acid cotransporter [Medica...    87   1e-15
gb|AFK35401.1| unknown [Lotus japonicus]                               77   1e-12
ref|XP_003538535.1| PREDICTED: uncharacterized sodium-dependent ...    58   7e-07
ref|XP_003517442.1| PREDICTED: uncharacterized sodium-dependent ...    57   2e-06
gb|ACU23668.1| unknown [Glycine max]                                   57   2e-06

>ref|XP_003611208.1| Ileal sodium/bile acid cotransporter [Medicago truncatula]
           gi|355512543|gb|AES94166.1| Ileal sodium/bile acid
           cotransporter [Medicago truncatula]
          Length = 428

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/74 (63%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = -2

Query: 248 SSRAKQLHNNVSCPRLSFLYVGKPPIVVPCRTNLSSPFSIRLGSQYFPQW-SSKLPLKCA 72
           S R  QLHN VSC  LS  +V +PPI VPC TNLSS FSI  GS +  ++ SSK  LKCA
Sbjct: 5   SCRVNQLHN-VSCSHLSLFHVRRPPIYVPCSTNLSSIFSIPSGSHFLRKYRSSKFLLKCA 63

Query: 71  SLNSSGSLIPDPVP 30
           SLNSSGSL PDP+P
Sbjct: 64  SLNSSGSLTPDPIP 77


>gb|AFK35401.1| unknown [Lotus japonicus]
          Length = 414

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/77 (55%), Positives = 49/77 (63%)
 Frame = -2

Query: 251 NSSRAKQLHNNVSCPRLSFLYVGKPPIVVPCRTNLSSPFSIRLGSQYFPQWSSKLPLKCA 72
           +SS  KQ   ++  P LS  YV K P+ V CRTN++SPFSI L     P WS KLPLKCA
Sbjct: 3   SSSILKQQWQSLRSPLLS--YVRKSPVSVRCRTNVTSPFSIHLRPHLPPHWSPKLPLKCA 60

Query: 71  SLNSSGSLIPDPVPVHS 21
            L SS SL PD  PVHS
Sbjct: 61  PLTSSDSLGPDQFPVHS 77


>ref|XP_003538535.1| PREDICTED: uncharacterized sodium-dependent transporter yocS-like
           [Glycine max]
          Length = 416

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 46/90 (51%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
 Frame = -2

Query: 254 MNSSRAKQLH-NNV-SCPRLSFLYVGKPPIVVPC-----RTNLSSPFSIRLGSQYFPQWS 96
           M SS  K  H NNV S   LS       PI+VPC       N+SSPFSIR  S  FP  S
Sbjct: 1   MISSGLKPKHFNNVHSLFNLSKSQQPPNPIIVPCCRTNTNNNISSPFSIRFNSP-FPYRS 59

Query: 95  SKLPLKCASLNSSGSLIPDPVPVHSYPTQM 6
            K+PLKCA L+SS SL PDP    S  TQM
Sbjct: 60  PKIPLKCAPLHSSDSLPPDP---SSASTQM 86


>ref|XP_003517442.1| PREDICTED: uncharacterized sodium-dependent transporter yocS-like
           [Glycine max]
          Length = 408

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/58 (55%), Positives = 39/58 (67%)
 Frame = -2

Query: 182 KPPIVVPCRTNLSSPFSIRLGSQYFPQWSSKLPLKCASLNSSGSLIPDPVPVHSYPTQ 9
           KPPI++PC   +SSP SIR  S +FP  S+K+PLKCA L SS SL PD   +   PTQ
Sbjct: 24  KPPILLPCCPTISSPCSIRFNS-HFPYRSTKVPLKCAPLPSSDSLPPD---LSDAPTQ 77


>gb|ACU23668.1| unknown [Glycine max]
          Length = 408

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/58 (55%), Positives = 39/58 (67%)
 Frame = -2

Query: 182 KPPIVVPCRTNLSSPFSIRLGSQYFPQWSSKLPLKCASLNSSGSLIPDPVPVHSYPTQ 9
           KPPI++PC   +SSP SIR  S +FP  S+K+PLKCA L SS SL PD   +   PTQ
Sbjct: 24  KPPILLPCCPTISSPCSIRFNS-HFPYRSTKVPLKCAPLPSSDSLPPD---LSDAPTQ 77


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