BLASTX nr result

ID: Glycyrrhiza23_contig00032809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032809
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...   130   1e-28
emb|CBI20464.3| unnamed protein product [Vitis vinifera]               94   2e-27
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...    93   3e-27
ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-l...   105   3e-21
ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-15

>ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           25-like [Glycine max]
          Length = 417

 Score =  130 bits (327), Expect = 1e-28
 Identities = 78/146 (53%), Positives = 86/146 (58%)
 Frame = -1

Query: 533 MDLLCDAYSNASDDNDEFEEQPKRQRLYHXXXXXXXXXXXXXXXXXXXXXXXXXXLIPGS 354
           MDLLC+AYSNASD  DE EE PKRQR+                             +PG 
Sbjct: 1   MDLLCNAYSNASDHEDEEEEPPKRQRV--SLSSPNPLKRHLPLSSHPSFNHQTQAPMPGR 58

Query: 353 YVSKRQRASMCPLPTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNLNLI 174
           Y+SKRQRA M P          P       S SI DADI H ILSLLK KAKGHQ+ NLI
Sbjct: 59  YISKRQRALMAP----------PLPLFLTRSWSILDADIHHNILSLLKSKAKGHQSPNLI 108

Query: 173 SEKLSATLCGHSKAVNAIHWSSTHAY 96
           SEKLSA+L GH+KAVNAIHWSSTHA+
Sbjct: 109 SEKLSASLYGHTKAVNAIHWSSTHAH 134



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 31/54 (57%), Positives = 34/54 (62%), Gaps = 8/54 (14%)
 Frame = -2

Query: 139 QKLSMLYIGHQLMLTA--------HLLASAGMDHMVCIWNVWSRDMKKACALNF 2
           +KLS    GH   + A        HLLASAGMDH VCIWNVW R+ KKAC LNF
Sbjct: 110 EKLSASLYGHTKAVNAIHWSSTHAHLLASAGMDHAVCIWNVWGRNQKKACVLNF 163


>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 93.6 bits (231), Expect(2) = 2e-27
 Identities = 59/149 (39%), Positives = 81/149 (54%)
 Frame = -1

Query: 542 RAEMDLLCDAYSNASDDNDEFEEQPKRQRLYHXXXXXXXXXXXXXXXXXXXXXXXXXXLI 363
           ++ MDLLC+AYS  SDD+D+ E +P  +                              LI
Sbjct: 86  KSAMDLLCNAYSTPSDDDDD-EPRPVAE--------PTPPPLKRFKPQNPPLLPKPYPLI 136

Query: 362 PGSYVSKRQRASMCPLPTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNL 183
            G Y+SKR+R+ + P  +  P  P PA+S+  + GSISD+D+P  ILS L+ +AKG   L
Sbjct: 137 AGRYISKRERSLLSPALS--PPLPNPAASASPVMGSISDSDLPRDILSSLRHQAKGRSQL 194

Query: 182 NLISEKLSATLCGHSKAVNAIHWSSTHAY 96
             ISE+LS  L  H K+VN I WS THA+
Sbjct: 195 GRISERLSVDLKSHKKSVNTIQWSPTHAH 223



 Score = 54.3 bits (129), Expect(2) = 2e-27
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = -2

Query: 94  AHLLASAGMDHMVCIWNVWSRDMKKA 17
           AHLLASAGMDH +CIWN WSRD KKA
Sbjct: 222 AHLLASAGMDHAICIWNAWSRDQKKA 247


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score = 92.8 bits (229), Expect(2) = 3e-27
 Identities = 59/146 (40%), Positives = 79/146 (54%)
 Frame = -1

Query: 533 MDLLCDAYSNASDDNDEFEEQPKRQRLYHXXXXXXXXXXXXXXXXXXXXXXXXXXLIPGS 354
           MDLLC+AYS  SDD+D+ E +P  +                              LI G 
Sbjct: 1   MDLLCNAYSTPSDDDDD-EPRPVAE--------PTPPPLKRFKPQNPPLLPKPYPLIAGR 51

Query: 353 YVSKRQRASMCPLPTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNLNLI 174
           Y+SKR+R+ + P  +  P  P PA+S+  + GSISD+D+P  ILS L+ +AKG   L  I
Sbjct: 52  YISKRERSLLSPALS--PPLPNPAASASPVMGSISDSDLPRDILSSLRHQAKGRSQLGRI 109

Query: 173 SEKLSATLCGHSKAVNAIHWSSTHAY 96
           SE+LS  L  H K+VN I WS THA+
Sbjct: 110 SERLSVDLKSHKKSVNTIQWSPTHAH 135



 Score = 54.3 bits (129), Expect(2) = 3e-27
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = -2

Query: 94  AHLLASAGMDHMVCIWNVWSRDMKKA 17
           AHLLASAGMDH +CIWN WSRD KKA
Sbjct: 134 AHLLASAGMDHAICIWNAWSRDQKKA 159


>ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-like [Glycine max]
          Length = 359

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/73 (75%), Positives = 59/73 (80%)
 Frame = -1

Query: 314 PTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNLNLISEKLSATLCGHSK 135
           P  LP  PVP  S F LSGSI DADI H ILSLLK KAKGHQ+ NLISEKLSATL GH+K
Sbjct: 5   PAPLPE-PVPVPSPFTLSGSILDADIHHNILSLLKSKAKGHQSPNLISEKLSATLYGHTK 63

Query: 134 AVNAIHWSSTHAY 96
           AVNAIHWSS+HA+
Sbjct: 64  AVNAIHWSSSHAH 76



 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 32/54 (59%), Positives = 35/54 (64%), Gaps = 8/54 (14%)
 Frame = -2

Query: 139 QKLSMLYIGHQLMLTA--------HLLASAGMDHMVCIWNVWSRDMKKACALNF 2
           +KLS    GH   + A        HLLASAGMDH VCIWNVWSR+ KKAC LNF
Sbjct: 52  EKLSATLYGHTKAVNAIHWSSSHAHLLASAGMDHAVCIWNVWSRNQKKACVLNF 105


>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 56.6 bits (135), Expect(2) = 4e-15
 Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
 Frame = -1

Query: 533 MDLLCDAYSNASDDNDEFEEQPKRQRLYHXXXXXXXXXXXXXXXXXXXXXXXXXXL-IPG 357
           MDLLC AYSN+SD+  E E + + +  Y                             +PG
Sbjct: 1   MDLLCHAYSNSSDEEPEPEPESESKPEYGPEFRPFIPPPPKRFKPETPSQNFRTEAPVPG 60

Query: 356 SYVSKRQRASMCPLPTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNLNL 177
            Y+SKR+RA    L    P  P PA++             P+     L     G  +L+ 
Sbjct: 61  RYISKRERA----LSAQSPRVPNPATN-------------PN-----LNPNPPGRASLSQ 98

Query: 176 ISEKLSATLCGHSKAVNAIHWSSTHAY 96
           I ++L+  L  H+KAVNA+ WS +HA+
Sbjct: 99  IPKRLAVDLRSHTKAVNALDWSPSHAH 125



 Score = 49.7 bits (117), Expect(2) = 4e-15
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 94  AHLLASAGMDHMVCIWNVWSRDMKKA 17
           AHLLASAGMD  VC+WNVWSRD K A
Sbjct: 124 AHLLASAGMDQTVCVWNVWSRDQKIA 149


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