BLASTX nr result

ID: Glycyrrhiza23_contig00032800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032800
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590599.1| FAR1-related protein [Medicago truncatula] g...    90   2e-16
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    81   1e-13
ref|XP_003597711.1| FAR1-related protein [Medicago truncatula] g...    80   1e-13
ref|XP_003616094.1| FAR1-related protein [Medicago truncatula] g...    68   9e-10
ref|XP_003628753.1| hypothetical protein MTR_8g066350 [Medicago ...    58   9e-07

>ref|XP_003590599.1| FAR1-related protein [Medicago truncatula]
           gi|355479647|gb|AES60850.1| FAR1-related protein
           [Medicago truncatula]
          Length = 418

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 38/103 (36%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = +3

Query: 42  DEGNTIEQEIMGEGNVDG-TYNEDDDIELNGVEDFGKVNFQDLSAQQLMRIHFANVEVAF 218
           + GNT   +++GE N +G + N D +  +N + D  K++ +++S +++MR HF++ EVAF
Sbjct: 43  ENGNTSVDDVVGESNSEGFSCNYDAETAVNNMADIEKIDLKEISCEEVMRYHFSDREVAF 102

Query: 219 LFYNMYGNIKGFGARKSKTVWNINGEMIQQTLLCNKEGHRVER 347
           +FY+ Y  + GF  R+S+ V N+N ++++QT LC++EG R ++
Sbjct: 103 MFYSFYACLNGFAGRRSRNVRNVNRQIVRQTFLCHREGIRDDK 145


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
 Frame = +3

Query: 66   EIMGEGNVDGTYNEDDDIELNGVEDFGKVNFQDLSAQQLMRIHFANVEVAFLFYNMYGNI 245
            + M  G+++          + G+ED GK++F+ L+A  +M+ HF N+ VA+ FYN Y  +
Sbjct: 1145 QFMEFGDIESDMKVGFGFAIEGMEDIGKIDFKKLNASDVMKFHFPNIAVAYTFYNWYARM 1204

Query: 246  KGFGARKSKTVWNINGEMIQQTLLCNKEGHR---VERNK 353
             GF AR+SK   N N E+IQQ  +C ++G R   +E NK
Sbjct: 1205 NGFSARRSKVRRNKNNEIIQQIFVCYRQGFREKKLENNK 1243


>ref|XP_003597711.1| FAR1-related protein [Medicago truncatula]
           gi|355486759|gb|AES67962.1| FAR1-related protein
           [Medicago truncatula]
          Length = 211

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
 Frame = +3

Query: 51  NTIEQEIMGEGNVDGTYNEDDDIE----------LNGVEDFGKVNFQDLSAQQLMRIHFA 200
           N+  ++IM        + E  DIE          + G+ED GK++F+ L+A  +M+ HF 
Sbjct: 3   NSNNEQIMSSSENTSQFMEFGDIESDMKVGFGFAIQGMEDIGKIDFKKLNASDVMKFHFP 62

Query: 201 NVEVAFLFYNMYGNIKGFGARKSKTVWNINGEMIQQTLLCNKEGHR---VERNK 353
           N+ VA+ FYN Y  + GF AR+ K   N N E+IQQ  +C ++G R   +E NK
Sbjct: 63  NIAVAYAFYNWYARMNGFSARRRKVRRNKNNEIIQQIFVCYRQGFREKKLENNK 116


>ref|XP_003616094.1| FAR1-related protein [Medicago truncatula]
           gi|355517429|gb|AES99052.1| FAR1-related protein
           [Medicago truncatula]
          Length = 347

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/97 (38%), Positives = 54/97 (55%)
 Frame = +3

Query: 66  EIMGEGNVDGTYNEDDDIELNGVEDFGKVNFQDLSAQQLMRIHFANVEVAFLFYNMYGNI 245
           E   EG      +E DD       D  + N +  +  +    +F +  VAF+FYN YG  
Sbjct: 84  EDCSEGLGGNNQSESDDCS----SDENEGNTEAETNNEGYGCNFDSENVAFMFYNWYGCS 139

Query: 246 KGFGARKSKTVWNINGEMIQQTLLCNKEGHRVERNKD 356
            GF  RKS+ V N+ GE++QQT LC++EG+R ERN++
Sbjct: 140 HGFAGRKSRVVRNVKGEIVQQTFLCHREGNRSERNRN 176


>ref|XP_003628753.1| hypothetical protein MTR_8g066350 [Medicago truncatula]
           gi|355522775|gb|AET03229.1| hypothetical protein
           MTR_8g066350 [Medicago truncatula]
          Length = 170

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +3

Query: 12  LSDDDGVRDEDEGNTIEQEIMGE-GNVDGTYNEDDDIELNGVEDFGKVNFQDLSAQQLMR 188
           L D+D    + EG TIE ++ G   +V    + ++   +N +ED   +NF++++ Q  +R
Sbjct: 23  LVDNDVEGYDIEGETIEDDVEGSVSDVVTGCSFEEAFAVNWLEDISLINFKEVTKQDFLR 82

Query: 189 IHFANVEVAFLFYNMYGNIKGFGARKSK 272
            H  +V VA+ FYN Y +  GF  RK+K
Sbjct: 83  YHCVDVGVAYTFYNWYASYNGFAVRKAK 110


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