BLASTX nr result

ID: Glycyrrhiza23_contig00032796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032796
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592180.1| ABC transporter G family member [Medicago tr...    90   2e-16
ref|XP_002513627.1| ATP-binding cassette transporter, putative [...    84   2e-14
ref|XP_002329680.1| white-brown-complex ABC transporter family [...    81   8e-14
emb|CBI22616.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8...    80   2e-13

>ref|XP_003592180.1| ABC transporter G family member [Medicago truncatula]
           gi|355481228|gb|AES62431.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 610

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 FKHCTPTPPTHILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSA 3
           FKHCTPTPP +ILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSA
Sbjct: 39  FKHCTPTPPNYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSA 83


>ref|XP_002513627.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223547535|gb|EEF49030.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 442

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = -1

Query: 140 LFKHCTPTPPTHILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSA 3
           LFKHCT TPPT+IL+DVS TAYPS+ILAIVGPSGAGKS+LLDIL+A
Sbjct: 60  LFKHCTTTPPTYILRDVSFTAYPSQILAIVGPSGAGKSSLLDILAA 105


>ref|XP_002329680.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222870588|gb|EEF07719.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 593

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/46 (82%), Positives = 44/46 (95%)
 Frame = -1

Query: 140 LFKHCTPTPPTHILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSA 3
           LFK CT TPP++ILK+VSLTAYPS+ILA+VGPSGAGKSTLLDIL+A
Sbjct: 35  LFKQCTTTPPSYILKEVSLTAYPSQILAVVGPSGAGKSTLLDILAA 80


>emb|CBI22616.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/73 (57%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -1

Query: 212 HQSYTLTAXXXXXXXXXXXXXTIA---LFKHCTPTPPTHILKDVSLTAYPSEILAIVGPS 42
           H++Y +TA             TI    LF+ CT TPPT+IL+D+ LTAYPS++LAIVGPS
Sbjct: 20  HKTYRITASSISYTKPTTNNYTIVPTFLFQPCTTTPPTYILRDICLTAYPSQVLAIVGPS 79

Query: 41  GAGKSTLLDILSA 3
           GAGKSTLLDIL+A
Sbjct: 80  GAGKSTLLDILAA 92


>ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]
          Length = 597

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/73 (57%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -1

Query: 212 HQSYTLTAXXXXXXXXXXXXXTIA---LFKHCTPTPPTHILKDVSLTAYPSEILAIVGPS 42
           H++Y +TA             TI    LF+ CT TPPT+IL+D+ LTAYPS++LAIVGPS
Sbjct: 12  HKTYRITASSISYTKPTTNNYTIVPTFLFQPCTTTPPTYILRDICLTAYPSQVLAIVGPS 71

Query: 41  GAGKSTLLDILSA 3
           GAGKSTLLDIL+A
Sbjct: 72  GAGKSTLLDILAA 84


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