BLASTX nr result

ID: Glycyrrhiza23_contig00032789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032789
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541988.1| PREDICTED: uncharacterized protein LOC100810...   108   6e-22
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    76   3e-12
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    73   2e-11
ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2...    69   4e-10
ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258...    68   7e-10

>ref|XP_003541988.1| PREDICTED: uncharacterized protein LOC100810773 [Glycine max]
          Length = 1086

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/87 (64%), Positives = 68/87 (78%)
 Frame = -2

Query: 267  LILAKQEKTVDINLLSMSRGTSHMLLMWGAACLFDELKVFQDGSTSTSSLKSLFGRPLFE 88
            LIL+KQ K  DIN  S +    HMLLMWGA+CLFDELKVF DG TS+S++KSLFG+PL +
Sbjct: 866  LILSKQCKIFDIN--SPNWTIFHMLLMWGASCLFDELKVFHDGETSSSNVKSLFGQPLLK 923

Query: 87   EAIQEFLSILSEDGEDTHTSNCSVLLK 7
            EA+ EF S+LS+DGE   +SNCS LLK
Sbjct: 924  EAMHEFSSLLSQDGEHIDSSNCSTLLK 950


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/87 (45%), Positives = 62/87 (71%)
 Frame = -2

Query: 267  LILAKQEKTVDINLLSMSRGTSHMLLMWGAACLFDELKVFQDGSTSTSSLKSLFGRPLFE 88
            LI+A+Q+KT++ +L S+SR  S MLLMWGA+ LF++L  F  G+ + SS  +LF +   +
Sbjct: 1026 LIIARQDKTLESSLHSISRAASDMLLMWGASYLFEKLSEFHCGNDTASSGNTLFEQSHLK 1085

Query: 87   EAIQEFLSILSEDGEDTHTSNCSVLLK 7
            + IQEFL+I+ + G+D   SN S++LK
Sbjct: 1086 DVIQEFLTIIIQKGKDNTPSN-SIILK 1111


>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837824|gb|EEE76189.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1996

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/85 (43%), Positives = 57/85 (67%)
 Frame = -2

Query: 267 LILAKQEKTVDINLLSMSRGTSHMLLMWGAACLFDELKVFQDGSTSTSSLKSLFGRPLFE 88
           LI+A+Q+KT+D NL  +++G SHMLLMWG + LFD+L  F  G+   SS   L  +   +
Sbjct: 659 LIVARQDKTLDRNLQRINQGASHMLLMWGVSYLFDKLSEFNCGNDPASSGTLLSEQSHMK 718

Query: 87  EAIQEFLSILSEDGEDTHTSNCSVL 13
           + IQEFL+I+++ G+D +  N  +L
Sbjct: 719 DVIQEFLTIVTQKGKDKNLINSIIL 743


>ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1|
           mom(plant), putative [Ricinus communis]
          Length = 1982

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/87 (42%), Positives = 58/87 (66%)
 Frame = -2

Query: 267 LILAKQEKTVDINLLSMSRGTSHMLLMWGAACLFDELKVFQDGSTSTSSLKSLFGRPLFE 88
           LILAK +K +D N+ S+SR T+  LLM GA+ LF +L  FQ+ S   ++  S F     +
Sbjct: 639 LILAKHDKILDSNVQSISRATTQSLLMRGASYLFRKLDEFQNSSILNTNRSSSFDESSEK 698

Query: 87  EAIQEFLSILSEDGEDTHTSNCSVLLK 7
           + I++FL+ILS+D +D ++S  SV++K
Sbjct: 699 DVIRDFLTILSQDAKDNNSSTFSVIVK 725


>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
          Length = 1534

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/87 (40%), Positives = 53/87 (60%)
 Frame = -2

Query: 267 LILAKQEKTVDINLLSMSRGTSHMLLMWGAACLFDELKVFQDGSTSTSSLKSLFGRPLFE 88
           LILAK +  +D NL ++SR TSHMLLMWGA+ LF++L+ F       S   +   + L +
Sbjct: 442 LILAKHDMALDSNLQNISRSTSHMLLMWGASYLFNKLEKFHGSDAPDSRTDTSSEQSLLK 501

Query: 87  EAIQEFLSILSEDGEDTHTSNCSVLLK 7
             +QE L +L  +G +   SN S+++K
Sbjct: 502 GVMQELLILLPHNGANIDLSNSSIIIK 528


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