BLASTX nr result
ID: Glycyrrhiza23_contig00032782
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00032782 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ... 127 1e-27 ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ... 121 5e-26 emb|CBI20820.3| unnamed protein product [Vitis vinifera] 115 5e-24 ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ... 114 1e-23 ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20 >ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine max] Length = 1857 Score = 127 bits (318), Expect = 1e-27 Identities = 78/170 (45%), Positives = 91/170 (53%), Gaps = 59/170 (34%) Frame = -3 Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156 EMLKTYSTGLLAVCL G G +VEDVLTSGLS KLMRYLR+ VL ETSG+Q D+ TE+R Sbjct: 170 EMLKTYSTGLLAVCLVGQGPIVEDVLTSGLSAKLMRYLRISVLRETSGNQKDVTHITESR 229 Query: 155 HASGNTSTRGRDDGR------------------EDSARDDSSIRR--------------- 75 HAS NTS RGRDDGR ++ + DD ++ R Sbjct: 230 HASANTSGRGRDDGRGRFRQLLESNHLDDTRMIDERSLDDVTLERGPDRSINSDGEDRWH 289 Query: 74 --------------------------MNRGWGRSRGKGRDNEGNVESEAV 3 NRGWGRSRGKGR +EG VES+ + Sbjct: 290 CRDIRDGRIKYGEHDDNIRDDSSRRRANRGWGRSRGKGRLSEGVVESDPI 339 >ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine max] Length = 1868 Score = 121 bits (304), Expect = 5e-26 Identities = 60/75 (80%), Positives = 65/75 (86%) Frame = -3 Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156 EMLKTYSTGLLAVCL G GQ+VEDVLTSGLS KLMRYLR+ VLGETSG+Q D+ TE+R Sbjct: 172 EMLKTYSTGLLAVCLDGQGQIVEDVLTSGLSAKLMRYLRISVLGETSGNQKDVTHITESR 231 Query: 155 HASGNTSTRGRDDGR 111 HAS NTS RGRDDGR Sbjct: 232 HASTNTSARGRDDGR 246 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 8/58 (13%) Frame = -3 Query: 152 ASGNTSTRGRD--DGR------EDSARDDSSIRRMNRGWGRSRGKGRDNEGNVESEAV 3 + G + R RD DGR +D+ RDDSS RR NRGWGRSRGKGR NEG VES+ + Sbjct: 296 SDGEDTWRCRDIRDGRIKYGEHDDNIRDDSSRRRANRGWGRSRGKGRVNEGAVESDPI 353 >emb|CBI20820.3| unnamed protein product [Vitis vinifera] Length = 1760 Score = 115 bits (287), Expect = 5e-24 Identities = 70/134 (52%), Positives = 83/134 (61%), Gaps = 25/134 (18%) Frame = -3 Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156 EML+TYSTGLLA+CL+GGGQVVEDVLTSGLS KLMRYLR RVLGET+ SQ D + E++ Sbjct: 184 EMLRTYSTGLLALCLAGGGQVVEDVLTSGLSAKLMRYLRTRVLGETNTSQKDGSHIAESK 243 Query: 155 HASGNTSTRGRDDGR-------------------EDSARDDSSIRRMNR--GW----GRS 51 + G T RGRD+GR E S D S R +R GW Sbjct: 244 NTPGATCMRGRDEGRSRLRLVLETNHLDDPRIIDEGSLHDQSVERDHDRSIGWQTHGEEL 303 Query: 50 RGKGRDNEGNVESE 9 +GKGR NEG +E+E Sbjct: 304 KGKGRVNEGAIENE 317 >ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis vinifera] Length = 2024 Score = 114 bits (284), Expect = 1e-23 Identities = 73/163 (44%), Positives = 85/163 (52%), Gaps = 54/163 (33%) Frame = -3 Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156 EML+TYSTGLLA+CL+GGGQVVEDVLTSGLS KLMRYLR RVLGET+ SQ D + E++ Sbjct: 318 EMLRTYSTGLLALCLAGGGQVVEDVLTSGLSAKLMRYLRTRVLGETNTSQKDGSHIAESK 377 Query: 155 HASGNTSTRGRDDGR-------------------EDSARD-------------------- 93 + G T RGRD+GR E S D Sbjct: 378 NTPGATCMRGRDEGRSRLRLVLETNHLDDPRIIDEGSLHDQNDMYEVDADGEDRWHGRDL 437 Query: 92 ---------------DSSIRRMNRGWGRSRGKGRDNEGNVESE 9 D S RR NRG R +GKGR NEG +E+E Sbjct: 438 RDLKTKFGDHDENVRDDSKRRANRGLSRLKGKGRVNEGAIENE 480 >ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1| predicted protein [Populus trichocarpa] Length = 1791 Score = 103 bits (258), Expect = 1e-20 Identities = 53/75 (70%), Positives = 61/75 (81%) Frame = -3 Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156 EMLKTYSTGLLAV L+ GGQ+VEDVLTSGLS KLMRYLR+RVLGE S SQ D + TE + Sbjct: 109 EMLKTYSTGLLAVGLASGGQIVEDVLTSGLSAKLMRYLRIRVLGEASASQKDASYLTEGK 168 Query: 155 HASGNTSTRGRDDGR 111 +AS T RGR++GR Sbjct: 169 NASSATCIRGREEGR 183