BLASTX nr result

ID: Glycyrrhiza23_contig00032782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032782
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   127   1e-27
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   121   5e-26
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   114   1e-23
ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1857

 Score =  127 bits (318), Expect = 1e-27
 Identities = 78/170 (45%), Positives = 91/170 (53%), Gaps = 59/170 (34%)
 Frame = -3

Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156
           EMLKTYSTGLLAVCL G G +VEDVLTSGLS KLMRYLR+ VL ETSG+Q D+   TE+R
Sbjct: 170 EMLKTYSTGLLAVCLVGQGPIVEDVLTSGLSAKLMRYLRISVLRETSGNQKDVTHITESR 229

Query: 155 HASGNTSTRGRDDGR------------------EDSARDDSSIRR--------------- 75
           HAS NTS RGRDDGR                  ++ + DD ++ R               
Sbjct: 230 HASANTSGRGRDDGRGRFRQLLESNHLDDTRMIDERSLDDVTLERGPDRSINSDGEDRWH 289

Query: 74  --------------------------MNRGWGRSRGKGRDNEGNVESEAV 3
                                      NRGWGRSRGKGR +EG VES+ +
Sbjct: 290 CRDIRDGRIKYGEHDDNIRDDSSRRRANRGWGRSRGKGRLSEGVVESDPI 339


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/75 (80%), Positives = 65/75 (86%)
 Frame = -3

Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156
           EMLKTYSTGLLAVCL G GQ+VEDVLTSGLS KLMRYLR+ VLGETSG+Q D+   TE+R
Sbjct: 172 EMLKTYSTGLLAVCLDGQGQIVEDVLTSGLSAKLMRYLRISVLGETSGNQKDVTHITESR 231

Query: 155 HASGNTSTRGRDDGR 111
           HAS NTS RGRDDGR
Sbjct: 232 HASTNTSARGRDDGR 246



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 8/58 (13%)
 Frame = -3

Query: 152 ASGNTSTRGRD--DGR------EDSARDDSSIRRMNRGWGRSRGKGRDNEGNVESEAV 3
           + G  + R RD  DGR      +D+ RDDSS RR NRGWGRSRGKGR NEG VES+ +
Sbjct: 296 SDGEDTWRCRDIRDGRIKYGEHDDNIRDDSSRRRANRGWGRSRGKGRVNEGAVESDPI 353


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  115 bits (287), Expect = 5e-24
 Identities = 70/134 (52%), Positives = 83/134 (61%), Gaps = 25/134 (18%)
 Frame = -3

Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156
           EML+TYSTGLLA+CL+GGGQVVEDVLTSGLS KLMRYLR RVLGET+ SQ D +   E++
Sbjct: 184 EMLRTYSTGLLALCLAGGGQVVEDVLTSGLSAKLMRYLRTRVLGETNTSQKDGSHIAESK 243

Query: 155 HASGNTSTRGRDDGR-------------------EDSARDDSSIRRMNR--GW----GRS 51
           +  G T  RGRD+GR                   E S  D S  R  +R  GW       
Sbjct: 244 NTPGATCMRGRDEGRSRLRLVLETNHLDDPRIIDEGSLHDQSVERDHDRSIGWQTHGEEL 303

Query: 50  RGKGRDNEGNVESE 9
           +GKGR NEG +E+E
Sbjct: 304 KGKGRVNEGAIENE 317


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score =  114 bits (284), Expect = 1e-23
 Identities = 73/163 (44%), Positives = 85/163 (52%), Gaps = 54/163 (33%)
 Frame = -3

Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156
           EML+TYSTGLLA+CL+GGGQVVEDVLTSGLS KLMRYLR RVLGET+ SQ D +   E++
Sbjct: 318 EMLRTYSTGLLALCLAGGGQVVEDVLTSGLSAKLMRYLRTRVLGETNTSQKDGSHIAESK 377

Query: 155 HASGNTSTRGRDDGR-------------------EDSARD-------------------- 93
           +  G T  RGRD+GR                   E S  D                    
Sbjct: 378 NTPGATCMRGRDEGRSRLRLVLETNHLDDPRIIDEGSLHDQNDMYEVDADGEDRWHGRDL 437

Query: 92  ---------------DSSIRRMNRGWGRSRGKGRDNEGNVESE 9
                          D S RR NRG  R +GKGR NEG +E+E
Sbjct: 438 RDLKTKFGDHDENVRDDSKRRANRGLSRLKGKGRVNEGAIENE 480


>ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1|
           predicted protein [Populus trichocarpa]
          Length = 1791

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/75 (70%), Positives = 61/75 (81%)
 Frame = -3

Query: 335 EMLKTYSTGLLAVCLSGGGQVVEDVLTSGLSVKLMRYLRLRVLGETSGSQNDINPSTENR 156
           EMLKTYSTGLLAV L+ GGQ+VEDVLTSGLS KLMRYLR+RVLGE S SQ D +  TE +
Sbjct: 109 EMLKTYSTGLLAVGLASGGQIVEDVLTSGLSAKLMRYLRIRVLGEASASQKDASYLTEGK 168

Query: 155 HASGNTSTRGRDDGR 111
           +AS  T  RGR++GR
Sbjct: 169 NASSATCIRGREEGR 183


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