BLASTX nr result

ID: Glycyrrhiza23_contig00032780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032780
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635897.1| Cc-nbs-lrr resistance protein [Medicago trun...    65   4e-09
ref|XP_003626884.1| Cc-nbs-lrr resistance protein [Medicago trun...    59   3e-07
ref|XP_003626903.1| NBS resistance protein [Medicago truncatula]...    57   2e-06

>ref|XP_003635897.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355501832|gb|AES83035.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1026

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 VNRPMHMCFTSESDTINLLRSFDASRLRTSIFLPRADDREFAQMTRA-LSVILRFKRLRI 39
           VNRP HMC + ES   +LLR     R+RT + L R  DRE   MTR  LSV++R K LR 
Sbjct: 491 VNRPTHMCLSLESHAFDLLRRRYPKRMRTFL-LQRKSDRENVWMTRDHLSVVVRLKYLRA 549

Query: 38  LNLSHSSLKKLP 3
           LNLSHSSL+  P
Sbjct: 550 LNLSHSSLRMFP 561


>ref|XP_003626884.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355520906|gb|AET01360.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 831

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -1

Query: 257 VASNDYYHLNSERK--VNRPMHMCFTSESDTINLLRSFDASRLRTSIFLPRADDREFAQM 84
           VA ND  +L+SE K  V  PMH+    + D I LL S DASRLRT I +P   + +  + 
Sbjct: 388 VAGNDCCYLDSETKNLVESPMHIMM--KMDDIGLLESVDASRLRTLILMP---NLKTFRN 442

Query: 83  TRALSVILRFKRLRILNLSHSSLKKL 6
              +S+I +FK LR+L LSH SL KL
Sbjct: 443 EEDMSIISKFKYLRVLKLSHCSLCKL 468


>ref|XP_003626903.1| NBS resistance protein [Medicago truncatula]
           gi|355520925|gb|AET01379.1| NBS resistance protein
           [Medicago truncatula]
          Length = 950

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = -1

Query: 257 VASNDYYHLNSE--RKVNRPMHMCFTSESDTINLLRSFDASRLRTSIFLPRADDREFAQM 84
           VA ND +++ SE  R+V RP+H+    E + ++LL S DA+RLRT I     ++ E    
Sbjct: 452 VAGNDCFYIESEAKRRVQRPVHVSL--EPNAVHLLGSLDANRLRTLILWSSNEEEEL--N 507

Query: 83  TRALSVILRFKRLRILNLSHSSLKKL 6
              +SVI +FK LR+L LS+ SL KL
Sbjct: 508 GDEMSVISKFKCLRVLMLSYCSLSKL 533


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