BLASTX nr result

ID: Glycyrrhiza23_contig00032765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032765
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609194.1| Transmembrane protein [Medicago truncatula] ...    81   1e-13
ref|XP_003549793.1| PREDICTED: transmembrane protein 19-like [Gl...    76   3e-12
ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cu...    61   8e-08
ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002515562.1| conserved hypothetical protein [Ricinus comm...    56   4e-06

>ref|XP_003609194.1| Transmembrane protein [Medicago truncatula]
           gi|355510249|gb|AES91391.1| Transmembrane protein
           [Medicago truncatula] gi|388493924|gb|AFK35028.1|
           unknown [Medicago truncatula]
          Length = 290

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = +2

Query: 116 MDSSPLQWIFQPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAM 286
           MD S  QWI +PLVAV+V  +IAFRAHRK SLSTSGA+ GF VM+LH+FVG+RFAAM
Sbjct: 1   MDPSFSQWI-RPLVAVTVGSLIAFRAHRKNSLSTSGAIAGFFVMSLHVFVGFRFAAM 56


>ref|XP_003549793.1| PREDICTED: transmembrane protein 19-like [Glycine max]
          Length = 293

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = +2

Query: 146 QPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAM 286
           Q  +AV +AF IAFRAHRKKSLSTSGA+ GF VMALHIFVGYRF AM
Sbjct: 11  QLFIAVFIAFSIAFRAHRKKSLSTSGAIAGFFVMALHIFVGYRFGAM 57


>ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus]
           gi|449508273|ref|XP_004163269.1| PREDICTED:
           transmembrane protein 19-like [Cucumis sativus]
          Length = 287

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = +2

Query: 140 IFQPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAM 286
           + QP VAV +A +IAFRA+R+KSL+ SGAL GFIVM+ H  + YR+ A+
Sbjct: 5   LIQPSVAVIIASIIAFRAYRRKSLNLSGALAGFIVMSTHFAINYRYGAV 53


>ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = +2

Query: 140 IFQPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAM 286
           + QP VAV ++FVIA +A+R+KSL  +GA+ GFIVM LH  + YRF A+
Sbjct: 5   VIQPSVAVLISFVIAIKAYRRKSLDVTGAVAGFIVMTLHFAISYRFGAI 53


>ref|XP_002515562.1| conserved hypothetical protein [Ricinus communis]
           gi|223545506|gb|EEF47011.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = +2

Query: 140 IFQPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAM 286
           I QPL+   ++  IA RA+++KSL+ SGA+ GF+VM +H  V YRF A+
Sbjct: 5   IIQPLIGALISSTIAIRAYKRKSLNLSGAIAGFLVMTIHFAVSYRFGAI 53


Top