BLASTX nr result

ID: Glycyrrhiza23_contig00032746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032746
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   150   1e-34
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   148   4e-34
ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-...   147   1e-33
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...   147   1e-33
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...   142   3e-32

>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/102 (72%), Positives = 82/102 (80%)
 Frame = -3

Query: 306  IGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPEKLVKVNHLESLLNYSFHDPS 127
            IGA+LSTG E  AL F++WIGIK+D  I+PYERH  +  EK V V +LESLLNYSF DPS
Sbjct: 1111 IGAYLSTGGEVLALFFMDWIGIKVDFMIVPYERHFQLQAEKFVNVRYLESLLNYSFRDPS 1170

Query: 126  LLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFY 1
            LLVEALTHGSY  PEIP C  YQRLEFLGDAVLDYLIT+H Y
Sbjct: 1171 LLVEALTHGSYMLPEIPSC--YQRLEFLGDAVLDYLITMHLY 1210


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/102 (71%), Positives = 83/102 (81%)
 Frame = -3

Query: 306  IGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPEKLVKVNHLESLLNYSFHDPS 127
            IGAFLSTG E+AAL F++W+GIK+  N IPY+RH  I PEKLV V+ LES LNYSFHD S
Sbjct: 1101 IGAFLSTGGEKAALLFMDWVGIKVSFNKIPYDRHFDIQPEKLVNVSFLESQLNYSFHDRS 1160

Query: 126  LLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFY 1
            LLVEA+THGSY  PE+P C  YQRLEFLGD+VLDYLIT H Y
Sbjct: 1161 LLVEAVTHGSYMLPEVPRC--YQRLEFLGDSVLDYLITWHLY 1200


>ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 756

 Score =  147 bits (370), Expect = 1e-33
 Identities = 78/105 (74%), Positives = 88/105 (83%), Gaps = 3/105 (2%)
 Frame = -3

Query: 306 IGAFLSTGDEEAALSFINWIGIKIDTNIIPYE--RHLSI-APEKLVKVNHLESLLNYSFH 136
           IGAF+ST DE+AALSFINWIGI +DTNI+PYE  RH+SI APE+LVK   L+S LNYSF 
Sbjct: 461 IGAFISTEDEKAALSFINWIGINVDTNIMPYENERHISIIAPEELVKAKLLKSRLNYSFK 520

Query: 135 DPSLLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFY 1
           DP LLVEALTH S KRPEI  C  Y+RLEFLGDAVLDY+IT+HFY
Sbjct: 521 DPYLLVEALTHSSGKRPEIRTC--YERLEFLGDAVLDYVITMHFY 563


>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1468

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/102 (71%), Positives = 82/102 (80%)
 Frame = -3

Query: 306  IGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPEKLVKVNHLESLLNYSFHDPS 127
            IGA+LSTG E  AL F++WIGIK+D    PYERH+ +  EK V V +LESLLNYSF+DPS
Sbjct: 1172 IGAYLSTGGEVTALLFMDWIGIKVDFMNTPYERHIQLQAEKFVNVRYLESLLNYSFNDPS 1231

Query: 126  LLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFY 1
            LLVEALTHGSY  PEIP C  YQRLEFLGDAVLDYLIT+H Y
Sbjct: 1232 LLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITLHMY 1271


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/102 (69%), Positives = 80/102 (78%)
 Frame = -3

Query: 306  IGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPEKLVKVNHLESLLNYSFHDPS 127
            IGAFLSTG E +AL F++W+GIK+  + IPYERH  I PEKL+ V  LES L YSFHD S
Sbjct: 1134 IGAFLSTGGEISALLFMDWVGIKVSFDKIPYERHFDIQPEKLLNVRFLESQLKYSFHDHS 1193

Query: 126  LLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFY 1
            LLVEALTHGSY  PE+P C  YQRLEFLGD+VLDYLIT H Y
Sbjct: 1194 LLVEALTHGSYMLPEVPRC--YQRLEFLGDSVLDYLITWHLY 1233


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