BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032745
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   217   7e-55
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   205   3e-51
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        205   3e-51
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   205   3e-51
ref|XP_003545365.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   201   4e-50

>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
           max]
          Length = 554

 Score =  217 bits (553), Expect = 7e-55
 Identities = 103/114 (90%), Positives = 106/114 (92%)
 Frame = -1

Query: 344 CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 165
           CAEALGTPIVGDYKYGWFVHSRWKQM RVDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 435 CAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 494

Query: 164 LHLHCRELVLPNIAKFLHVLQKSSEELHPSLIVQPDVLRFVATMPSHMRISWNL 3
           LHLHCRELVLPNI KF+HVL  SSEEL  SL  QPDVLRFVATMPSHMRISWNL
Sbjct: 495 LHLHCRELVLPNIVKFMHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNL 548


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  205 bits (522), Expect = 3e-51
 Identities = 95/115 (82%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
 Frame = -1

Query: 344 CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 165
           CAEALGTPIVGDYKYGWFVH RWKQM +VDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 371 CAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 430

Query: 164 LHLHCRELVLPNIAKFLHVL-QKSSEELHPSLIVQPDVLRFVATMPSHMRISWNL 3
           LHLHCRE+VLPNIAKFLHV+ Q+ +E LH  +I +PD+LRFVA+MPSHM+ISWNL
Sbjct: 431 LHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNL 485


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  205 bits (522), Expect = 3e-51
 Identities = 95/115 (82%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
 Frame = -1

Query: 344 CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 165
           CAEALGTPIVGDYKYGWFVH RWKQM +VDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 206 CAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 265

Query: 164 LHLHCRELVLPNIAKFLHVL-QKSSEELHPSLIVQPDVLRFVATMPSHMRISWNL 3
           LHLHCRE+VLPNIAKFLHV+ Q+ +E LH  +I +PD+LRFVA+MPSHM+ISWNL
Sbjct: 266 LHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNL 320


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudourine synthase 3, mitochondrial; AltName: Full=RNA
           pseudouridylate synthase 3; AltName: Full=RNA-uridine
           isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1|
           At1g78910 [Arabidopsis thaliana]
           gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis
           thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine
           synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  205 bits (522), Expect = 3e-51
 Identities = 95/115 (82%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
 Frame = -1

Query: 344 CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 165
           CAEALGTPIVGDYKYGWFVH RWKQM +VDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 358 CAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 417

Query: 164 LHLHCRELVLPNIAKFLHVL-QKSSEELHPSLIVQPDVLRFVATMPSHMRISWNL 3
           LHLHCRE+VLPNIAKFLHV+ Q+ +E LH  +I +PD+LRFVA+MPSHM+ISWNL
Sbjct: 418 LHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNL 472


>ref|XP_003545365.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 3,
           mitochondrial-like [Glycine max]
          Length = 228

 Score =  201 bits (512), Expect = 4e-50
 Identities = 100/114 (87%), Positives = 101/114 (88%)
 Frame = -1

Query: 344 CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 165
           CAEALGTPIVGDYKYGWFVHSRWKQM RVDIEPTTGKP      EGLDVQKGSVLS+VPL
Sbjct: 115 CAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKP------EGLDVQKGSVLSKVPL 168

Query: 164 LHLHCRELVLPNIAKFLHVLQKSSEELHPSLIVQPDVLRFVATMPSHMRISWNL 3
           LHLHCRELVLPNIAKFLHVL  SSEEL  SL  QPDVLRFVATMPSHMRISWNL
Sbjct: 169 LHLHCRELVLPNIAKFLHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNL 222