BLASTX nr result

ID: Glycyrrhiza23_contig00032719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032719
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PAR...   166   2e-39
ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PAR...   158   4e-37
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...    87   1e-15
ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
emb|CBI39748.3| unnamed protein product [Vitis vinifera]               84   1e-14

>ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 714

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/106 (78%), Positives = 89/106 (83%)
 Frame = -1

Query: 391 LLEGGNTCAANYDTYKEICGSPLSEGLFADQANAIGIKWKTKLTEYRVALGSEVLENPSV 212
           LLEGGNTC ANYDTY+EICGS LSEGLFADQA A+GIKWKTKLTEY+VA   +  ENPSV
Sbjct: 609 LLEGGNTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYKVASRGKEHENPSV 668

Query: 211 QDNVNTAMEFVEETKPNTIDQLRNAQSRGQASSFEIEDSCAAEANL 74
           QDNVNT M+ VE TKPNTIDQL NA S GQ S+FEIEDS  AEANL
Sbjct: 669 QDNVNTVMKNVERTKPNTIDQLGNAPSCGQVSTFEIEDSYVAEANL 714


>ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 718

 Score =  158 bits (400), Expect = 4e-37
 Identities = 84/108 (77%), Positives = 90/108 (83%), Gaps = 2/108 (1%)
 Frame = -1

Query: 391 LLEGGNTCAANYDTYKEICGSPLSEGLFADQANAIGIKWKTKLTEYRVALGSEVLENPSV 212
           LLEGGNTCAANYDTY EICGSPLSEGLFADQA  +GIKWKTKLTE +VA   E  ENPS+
Sbjct: 611 LLEGGNTCAANYDTYNEICGSPLSEGLFADQAKKVGIKWKTKLTECKVASRGEEHENPSL 670

Query: 211 QDN-VNTAMEFVEETKPNTIDQLRNAQSRGQASSFEIEDSC-AAEANL 74
           Q N VNTAM+ VE+TKPNTIDQL NA SRGQ S+FEIEDS   AEANL
Sbjct: 671 QANDVNTAMKNVEKTKPNTIDQLGNASSRGQVSTFEIEDSSRVAEANL 718


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
 Frame = -1

Query: 391 LLEGGNTCAANYDTYKEICGSPLSEGLFADQANAIGIKWKTKLTEYRVALGSEVLENPSV 212
           LLEGGNTCAA+Y+TYKEIC SP+S+ +FADQA A+GIKWKTKL E +  + ++  E+ S 
Sbjct: 618 LLEGGNTCAASYETYKEICSSPISKVMFADQAKAVGIKWKTKLIESKEKVKTQEDESFSK 677

Query: 211 QDN-VNTAMEFVEETKPNTIDQLRNAQSRGQASSFEIEDSCAA 86
           ++   + A +  +++K   I+ + +  S  + S  EI DS  A
Sbjct: 678 ENGATDAASDPADKSKTRKIEDVIDNLSDDRISGSEIIDSLYA 720


>ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|222847638|gb|EEE85185.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = -1

Query: 391 LLEGGNTCAANYDTYKEICGSPLSEGLFADQANAIGIKWKTKLTEYRVALGSEVLENPSV 212
           +LEGGNTCAA+Y+TYK+IC SP S+ LFADQA A+GI+WKTKL E +  L +E  +N   
Sbjct: 602 ILEGGNTCAASYETYKDICSSPTSKLLFADQAEAVGIRWKTKLVERKEELETEEQDNFHE 661

Query: 211 QDNVNTAMEFVEE 173
           ++  NT   +VE+
Sbjct: 662 ENAANTISVYVEQ 674


>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
 Frame = -1

Query: 391 LLEGGNTCAANYDTYKEICGSPLSEGLFADQANAIGIKWKTKLTEYRVALGSEVLENPSV 212
           LLEGGNTCAA+Y+TYKEIC SP+S+ +FADQA A+GIKWKTKL E +  + ++  E+ S 
Sbjct: 618 LLEGGNTCAASYETYKEICSSPISKVMFADQAKAVGIKWKTKLIESKEKVKTQEDESFSK 677

Query: 211 QDN-VNTAMEFVEETKPNTIDQLRNAQSRGQASSF 110
           ++   + A +  +++K   I+ + +  S  + S+F
Sbjct: 678 ENGATDAASDPADKSKTRKIEDVIDNLSDDRISAF 712


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