BLASTX nr result
ID: Glycyrrhiza23_contig00032707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00032707
(459 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [... 97 2e-18
gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliar... 97 2e-18
ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containin... 89 5e-16
ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containin... 61 1e-07
>ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 1146
Score = 96.7 bits (239), Expect = 2e-18
Identities = 58/102 (56%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = +3
Query: 66 SRKSSFNRNKDDNSRSRGEDSCVDWDTITRDNEKQHGREGRNPRK-NRDSWDWSYEAG-- 236
+RKSSFN NKDDNSR E S VD TI RDNEK H R+GRN +K NRDS DW YEAG
Sbjct: 248 TRKSSFNWNKDDNSRRHEEYSDVDRVTINRDNEKPHDRKGRNSQKSNRDSRDWIYEAGCD 307
Query: 237 SDWXXXXXXXXXXXXXXXXXXXXDNSNVTDESESDKDRGEME 362
D DNSNVTDESESDKDRG E
Sbjct: 308 EDRDGDGRKHHISRRKGSRHQSRDNSNVTDESESDKDRGHEE 349
Score = 84.0 bits (206), Expect = 1e-14
Identities = 53/136 (38%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Frame = +3
Query: 84 NRNKDDNSRSRGEDSCVDWDTITRDNEKQHGREGRNPRK-NRDSWDWSYEAGSDWXXXXX 260
+ ++ D R E S VDWDT++R+NEKQHG GRN +K NRDS YEAGSD
Sbjct: 337 DESESDKDRGHEEYSDVDWDTMSRENEKQHGSNGRNSQKWNRDSRYRIYEAGSDEDRHRK 396
Query: 261 XXXXXXXXXXXXXXXDNSNVTDESESDKDRG--------------EMETQHYSRKSSRHT 398
DNSNV DESESDKDRG + E QH S+ +
Sbjct: 397 RHHSSQRKGSRHRSRDNSNVADESESDKDRGHEKYSDVDWDTMSRDNEKQHDSKGKNSQK 456
Query: 399 RSGFQDYCEDHENEND 446
R+G Y D ++
Sbjct: 457 RNGDSKYQIDEAGSDE 472
Score = 77.4 bits (189), Expect = 1e-12
Identities = 55/135 (40%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = +3
Query: 66 SRKSSFNRNKDDNSRSRGED--SCVDWDTITRDNEKQHGREGRNPRK-NRDSWDWSYEAG 236
SR +S ++ ++ + RG + S VDWDT++RDNEKQH +G+N +K N DS EAG
Sbjct: 410 SRDNSNVADESESDKDRGHEKYSDVDWDTMSRDNEKQHDSKGKNSQKRNGDSKYQIDEAG 469
Query: 237 SDWXXXXXXXXXXXXXXXXXXXXDNSNVTDESESDKDRGEMETQH-YSRKSSRHTRSGFQ 413
SD D+ DES DKD+GEME QH YSRK
Sbjct: 470 SDEDRHRKKHLSSQMKESRHQSSDSGYGIDES--DKDKGEMEAQHGYSRK---------- 517
Query: 414 DYCEDHENENDKVDG 458
++ENENDKVDG
Sbjct: 518 ----NYENENDKVDG 528
>gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 96.7 bits (239), Expect = 2e-18
Identities = 58/102 (56%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = +3
Query: 66 SRKSSFNRNKDDNSRSRGEDSCVDWDTITRDNEKQHGREGRNPRK-NRDSWDWSYEAG-- 236
+RKSSFN NKDDNSR E S VD TI RDNEK H R+GRN +K NRDS DW YEAG
Sbjct: 246 TRKSSFNWNKDDNSRRHEEYSDVDRVTINRDNEKPHDRKGRNSQKSNRDSRDWIYEAGCD 305
Query: 237 SDWXXXXXXXXXXXXXXXXXXXXDNSNVTDESESDKDRGEME 362
D DNSNVTDESESDKDRG E
Sbjct: 306 EDRDGDGRKHHISRRKGSRHQSRDNSNVTDESESDKDRGHEE 347
Score = 84.0 bits (206), Expect = 1e-14
Identities = 53/136 (38%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Frame = +3
Query: 84 NRNKDDNSRSRGEDSCVDWDTITRDNEKQHGREGRNPRK-NRDSWDWSYEAGSDWXXXXX 260
+ ++ D R E S VDWDT++R+NEKQHG GRN +K NRDS YEAGSD
Sbjct: 335 DESESDKDRGHEEYSDVDWDTMSRENEKQHGSNGRNSQKWNRDSRYRIYEAGSDEDRHRK 394
Query: 261 XXXXXXXXXXXXXXXDNSNVTDESESDKDRG--------------EMETQHYSRKSSRHT 398
DNSNV DESESDKDRG + E QH S+ +
Sbjct: 395 RHHSSQRKGSRHRSRDNSNVADESESDKDRGHEKYSDVDWDTMSRDNEKQHDSKGKNSQK 454
Query: 399 RSGFQDYCEDHENEND 446
R+G Y D ++
Sbjct: 455 RNGDSKYQIDEAGSDE 470
Score = 74.3 bits (181), Expect = 9e-12
Identities = 52/134 (38%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Frame = +3
Query: 66 SRKSSFNRNKDDNSRSRGED--SCVDWDTITRDNEKQHGREGRNPRK-NRDSWDWSYEAG 236
SR +S ++ ++ + RG + S VDWDT++RDNEKQH +G+N +K N DS EAG
Sbjct: 408 SRDNSNVADESESDKDRGHEKYSDVDWDTMSRDNEKQHDSKGKNSQKRNGDSKYQIDEAG 467
Query: 237 SDWXXXXXXXXXXXXXXXXXXXXDNSNVTDESESDKDRGEMETQHYSRKSSRHTRSGFQD 416
SD D+ DES DKD+GEME QH
Sbjct: 468 SDEDRHRKKHLSSQMKESRHQSSDSGYGIDES--DKDKGEMEAQH--------------- 510
Query: 417 YCEDHENENDKVDG 458
D+ENENDKVDG
Sbjct: 511 ---DYENENDKVDG 521
>ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 88.6 bits (218), Expect = 5e-16
Identities = 60/125 (48%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Frame = +3
Query: 102 NSRSRGEDSCVDWDTITRDNEKQHGREGRNPRKNRDSWDWSYEAGSDWXXXXXXXXXXXX 281
NSR EDS V+W +TRDNEKQHGREGRN RK + + S++
Sbjct: 465 NSRRHEEDSDVEW--VTRDNEKQHGREGRNSRKQNRDEKRHHISKSNYQGGR-------- 514
Query: 282 XXXXXXXXDNSNVTDESESDKD---RGEMETQH--YSRKSSRHTRSGF-QDYCEDHENEN 443
D SES+KD RGEMETQH YSRKSSR+ RSG D + HENEN
Sbjct: 515 --------------DASESEKDFLGRGEMETQHDYYSRKSSRYRRSGLDDDDYKYHENEN 560
Query: 444 DKVDG 458
DKVDG
Sbjct: 561 DKVDG 565
>ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 60.8 bits (146), Expect = 1e-07
Identities = 37/57 (64%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Frame = +3
Query: 306 DNSNVTDESESDKD---RGEMETQH--YSRKSSRHTR-SGFQDYCEDHENENDKVDG 458
+N D SESDKD RGEMETQH YSRK SRH R SG QD + HENENDKV G
Sbjct: 440 NNQGGGDASESDKDLLGRGEMETQHDYYSRKRSRHRRRSGLQDEYKYHENENDKVYG 496