BLASTX nr result
ID: Glycyrrhiza23_contig00032670
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00032670 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi... 181 7e-44 ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ... 180 9e-44 ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi... 166 2e-39 emb|CBI25911.3| unnamed protein product [Vitis vinifera] 166 2e-39 ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2... 162 2e-38 >ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like [Glycine max] Length = 693 Score = 181 bits (458), Expect = 7e-44 Identities = 86/92 (93%), Positives = 88/92 (95%) Frame = -3 Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99 EIKRQVHVFLVGDTSHPK SDIHEFLGELSKK+K+EGYVPDTNFVLHDVEEEQKEQNL Y Sbjct: 565 EIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVY 624 Query: 98 HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3 HSEKLAV GIISTPPGTPIKVFKNLRTCVDC Sbjct: 625 HSEKLAVVFGIISTPPGTPIKVFKNLRTCVDC 656 >ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 802 Score = 180 bits (457), Expect = 9e-44 Identities = 86/92 (93%), Positives = 89/92 (96%) Frame = -3 Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99 EIKRQVHVFLVGDTSHPKISDIHE+LGELSKKMK+EGYV DTNFVLHDVEEEQKEQN+FY Sbjct: 541 EIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFY 600 Query: 98 HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3 HSEKLAVA GIIST PGTPIKVFKNLRTCVDC Sbjct: 601 HSEKLAVAFGIISTSPGTPIKVFKNLRTCVDC 632 >ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like, partial [Vitis vinifera] Length = 287 Score = 166 bits (420), Expect = 2e-39 Identities = 80/92 (86%), Positives = 85/92 (92%) Frame = -3 Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99 EIKR+VHVFLVGDTSH K +IHEFLG+LSK+MK+EGYVPDTNFVLHDVEEEQKEQNL Y Sbjct: 159 EIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSY 218 Query: 98 HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3 HSEKLAVA GIISTP GT IKVFKNLRTCVDC Sbjct: 219 HSEKLAVAFGIISTPAGTLIKVFKNLRTCVDC 250 >emb|CBI25911.3| unnamed protein product [Vitis vinifera] Length = 288 Score = 166 bits (420), Expect = 2e-39 Identities = 80/92 (86%), Positives = 85/92 (92%) Frame = -3 Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99 EIKR+VHVFLVGDTSH K +IHEFLG+LSK+MK+EGYVPDTNFVLHDVEEEQKEQNL Y Sbjct: 160 EIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSY 219 Query: 98 HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3 HSEKLAVA GIISTP GT IKVFKNLRTCVDC Sbjct: 220 HSEKLAVAFGIISTPAGTLIKVFKNLRTCVDC 251 >ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa] Length = 676 Score = 162 bits (411), Expect = 2e-38 Identities = 77/91 (84%), Positives = 84/91 (92%) Frame = -3 Query: 275 IKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFYH 96 IKR VHVFLVGD SHPK +I+EFLG+LSK+MK+EG+VPDTNFVLHDVE+EQKEQNL YH Sbjct: 549 IKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYH 608 Query: 95 SEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3 SEKLAVA GIISTP GTPIKVFKNLRTCVDC Sbjct: 609 SEKLAVAFGIISTPEGTPIKVFKNLRTCVDC 639