BLASTX nr result

ID: Glycyrrhiza23_contig00032670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032670
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ...   180   9e-44
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
emb|CBI25911.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38

>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/92 (93%), Positives = 88/92 (95%)
 Frame = -3

Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99
           EIKRQVHVFLVGDTSHPK SDIHEFLGELSKK+K+EGYVPDTNFVLHDVEEEQKEQNL Y
Sbjct: 565 EIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVY 624

Query: 98  HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3
           HSEKLAV  GIISTPPGTPIKVFKNLRTCVDC
Sbjct: 625 HSEKLAVVFGIISTPPGTPIKVFKNLRTCVDC 656


>ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512262|gb|AES93885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  180 bits (457), Expect = 9e-44
 Identities = 86/92 (93%), Positives = 89/92 (96%)
 Frame = -3

Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99
           EIKRQVHVFLVGDTSHPKISDIHE+LGELSKKMK+EGYV DTNFVLHDVEEEQKEQN+FY
Sbjct: 541 EIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFY 600

Query: 98  HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3
           HSEKLAVA GIIST PGTPIKVFKNLRTCVDC
Sbjct: 601 HSEKLAVAFGIISTSPGTPIKVFKNLRTCVDC 632


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/92 (86%), Positives = 85/92 (92%)
 Frame = -3

Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99
           EIKR+VHVFLVGDTSH K  +IHEFLG+LSK+MK+EGYVPDTNFVLHDVEEEQKEQNL Y
Sbjct: 159 EIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSY 218

Query: 98  HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3
           HSEKLAVA GIISTP GT IKVFKNLRTCVDC
Sbjct: 219 HSEKLAVAFGIISTPAGTLIKVFKNLRTCVDC 250


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/92 (86%), Positives = 85/92 (92%)
 Frame = -3

Query: 278 EIKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFY 99
           EIKR+VHVFLVGDTSH K  +IHEFLG+LSK+MK+EGYVPDTNFVLHDVEEEQKEQNL Y
Sbjct: 160 EIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSY 219

Query: 98  HSEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3
           HSEKLAVA GIISTP GT IKVFKNLRTCVDC
Sbjct: 220 HSEKLAVAFGIISTPAGTLIKVFKNLRTCVDC 251


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = -3

Query: 275 IKRQVHVFLVGDTSHPKISDIHEFLGELSKKMKQEGYVPDTNFVLHDVEEEQKEQNLFYH 96
           IKR VHVFLVGD SHPK  +I+EFLG+LSK+MK+EG+VPDTNFVLHDVE+EQKEQNL YH
Sbjct: 549 IKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYH 608

Query: 95  SEKLAVALGIISTPPGTPIKVFKNLRTCVDC 3
           SEKLAVA GIISTP GTPIKVFKNLRTCVDC
Sbjct: 609 SEKLAVAFGIISTPEGTPIKVFKNLRTCVDC 639


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