BLASTX nr result

ID: Glycyrrhiza23_contig00032665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032665
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   135   3e-30
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    99   5e-19
ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...    60   4e-08

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/66 (95%), Positives = 63/66 (95%)
 Frame = -3

Query: 274 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKICVCQVRFVLVGLGGFDQKCYAYAQDYPS 95
           APLPAYPYKTRVGGSRSYEVPTTRSTLPKGK CVCQVRF LVGLGGFDQKCYAY QDYPS
Sbjct: 205 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 264

Query: 94  SRKLRG 77
           SRKLRG
Sbjct: 265 SRKLRG 270


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +1

Query: 226 TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVCLGGVDTLARIR 366
           TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQV LGGVDTLARIR
Sbjct: 175 TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVSLGGVDTLARIR 221


>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 60.1 bits (144), Expect(2) = 4e-08
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = -3

Query: 340 PPNRLDEESILANKHNPYTHLGAPLPAYP 254
           PPN LDEESIL NKHNPYTHL APLPAYP
Sbjct: 128 PPNLLDEESILVNKHNPYTHLEAPLPAYP 156



 Score = 21.9 bits (45), Expect(2) = 4e-08
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 365 RIRASVSTPP 336
           RIR SVSTPP
Sbjct: 120 RIRTSVSTPP 129


Top