BLASTX nr result

ID: Glycyrrhiza23_contig00032654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032654
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l...   196   2e-48
ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-l...   196   2e-48
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...   192   3e-47
emb|CBI29360.3| unnamed protein product [Vitis vinifera]              192   3e-47
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]   192   3e-47

>ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
           max]
          Length = 642

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/104 (91%), Positives = 101/104 (97%)
 Frame = -2

Query: 315 NFTPLNGKPIRIMFSQRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           NFTPLNGKPIRIMFSQRDPSIRKSG+ NVFIKNLD SIDNKALHDTFAAFGTVLSCKVAL
Sbjct: 97  NFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVAL 156

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVR 4
           D SGQSKGYGFVQF+NE+AAQ+AIK+LNGMLINDKQVYVGLF+R
Sbjct: 157 DSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIR 200



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = -2

Query: 237 ANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFENEDAAQSAIKQ 58
           AN+++KNLD S  ++ L D F+ FGT+ SCKV +D +G+SKG GFV F   + A  A+ +
Sbjct: 318 ANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNE 377

Query: 57  LNGMLINDKQVYVGLFVR 4
           +NG LI  K +YV +  R
Sbjct: 378 MNGKLIGRKPLYVAVAQR 395



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/101 (35%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
 Frame = -2

Query: 303 LNGKPIRI-MFSQRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           +N K + + +F +R    + +G   + NV++KNL  +  ++ L   F  +GT+ S  V  
Sbjct: 188 INDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMK 247

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLI-NDKQVYVG 16
           D +G+S+ +GFV F+N D+A +A+++LNG  I ND+ +YVG
Sbjct: 248 DVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVG 288


>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
           max]
          Length = 652

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/104 (91%), Positives = 101/104 (97%)
 Frame = -2

Query: 315 NFTPLNGKPIRIMFSQRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           NFTPLNGKPIRIMFSQRDPSIRKSG+ NVFIKNLD SIDNKALHDTFAAFGTVLSCKVAL
Sbjct: 97  NFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVAL 156

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVR 4
           D SGQSKGYGFVQF+NE+AAQ+AIK+LNGMLINDKQVYVGLF+R
Sbjct: 157 DSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIR 200



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = -2

Query: 237 ANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFENEDAAQSAIKQ 58
           AN+++KNLD S  ++ L D F+ FGT+ SCKV +D +G+SKG GFV F   + A  A+ +
Sbjct: 318 ANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNE 377

Query: 57  LNGMLINDKQVYVGLFVR 4
           +NG LI  K +YV +  R
Sbjct: 378 MNGKLIGRKPLYVAVAQR 395



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/101 (35%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
 Frame = -2

Query: 303 LNGKPIRI-MFSQRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           +N K + + +F +R    + +G   + NV++KNL  +  ++ L   F  +GT+ S  V  
Sbjct: 188 INDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMK 247

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLI-NDKQVYVG 16
           D +G+S+ +GFV F+N D+A +A+++LNG  I ND+ +YVG
Sbjct: 248 DVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVG 288


>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
           [Vitis vinifera]
          Length = 1093

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/105 (89%), Positives = 100/105 (95%)
 Frame = -2

Query: 315 NFTPLNGKPIRIMFSQRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           NFTPLNGKPIRIMFS RDPSIRKSG+ANVFIKNLD SIDNKAL DTFAAFGTVLSCK+AL
Sbjct: 535 NFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIAL 594

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRH 1
           D +GQSKGYGFVQFE E+AAQ+AIK+LNGMLINDKQVYVGLFVRH
Sbjct: 595 DNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRH 639



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -2

Query: 288  IRIMFSQ-RDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKG 112
            +R  F Q R     K    N+++KNLD S++++ L + F+ FGT+ SCKV LD  G SKG
Sbjct: 738  LRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQGLSKG 797

Query: 111  YGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVR 4
             GFV F   + A  A+  +NG +I  K +YV +  R
Sbjct: 798  SGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQR 833



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
 Frame = -2

Query: 303 LNGKPIRI-MFSQRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           +N K + + +F +     R +G   + NV++KNL  +  +  L + F  +G++ S  V  
Sbjct: 626 INDKQVYVGLFVRHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMR 685

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQV-YVG 16
           D SG SK +GFV F++ D+A +A++ LNG   ND +V YVG
Sbjct: 686 DASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVG 726


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/105 (89%), Positives = 100/105 (95%)
 Frame = -2

Query: 315 NFTPLNGKPIRIMFSQRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           NFTPLNGKPIRIMFS RDPSIRKSG+ANVFIKNLD SIDNKAL DTFAAFGTVLSCK+AL
Sbjct: 75  NFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIAL 134

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRH 1
           D +GQSKGYGFVQFE E+AAQ+AIK+LNGMLINDKQVYVGLFVRH
Sbjct: 135 DNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRH 179



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -2

Query: 288 IRIMFSQ-RDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKG 112
           +R  F Q R     K    N+++KNLD S++++ L + F+ FGT+ SCKV LD  G SKG
Sbjct: 278 LRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQGLSKG 337

Query: 111 YGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVR 4
            GFV F   + A  A+  +NG +I  K +YV +  R
Sbjct: 338 SGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQR 373



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
 Frame = -2

Query: 303 LNGKPIRI-MFSQRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           +N K + + +F +     R +G   + NV++KNL  +  +  L + F  +G++ S  V  
Sbjct: 166 INDKQVYVGLFVRHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMR 225

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQV-YVG 16
           D SG SK +GFV F++ D+A +A++ LNG   ND +V YVG
Sbjct: 226 DASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVG 266


>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
          Length = 632

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/105 (89%), Positives = 100/105 (95%)
 Frame = -2

Query: 315 NFTPLNGKPIRIMFSQRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVAL 136
           NFTPLNGKPIRIMFS RDPSIRKSG+ANVFIKNLD SIDNKAL DTFAAFGTVLSCK+AL
Sbjct: 101 NFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIAL 160

Query: 135 DGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRH 1
           D +GQSKGYGFVQFE E+AAQ+AIK+LNGMLINDKQVYVGLFVRH
Sbjct: 161 DNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRH 205



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -2

Query: 288 IRIMFSQ-RDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKG 112
           +R  F Q R     K    N+++KNLD S++++ L + F+ FGT+ SCKV LD  G SKG
Sbjct: 304 LRAKFEQERKNKFEKFKGXNLYLKNLDDSVNDEKLXELFSEFGTITSCKVMLDPQGLSKG 363

Query: 111 YGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVR 4
            GFV F   + A  A+  +NG +I  K +YV +  R
Sbjct: 364 SGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQR 399



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -2

Query: 240 YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFENEDAAQSAIK 61
           + NV++KNL  +  +  L + F  +G++ S  V  D SG SK +GFV F++ D+A +A++
Sbjct: 217 FTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVE 276

Query: 60  QLNGMLINDKQV-YVG 16
            LNG   ND +V YVG
Sbjct: 277 HLNGATFNDDKVWYVG 292


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