BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032651
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    65   4e-09
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    64   1e-08
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   3e-08
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    62   5e-08
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...    56   3e-06

>gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 86

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = -3

Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
           +WK   PE ++FL+WLA HNS PT+ +L+ R I+  A C+RCN  VE   LHCV D
Sbjct: 16  IWKLKLPEKIKFLVWLACHNSVPTISLLNHRNIAPTATCSRCNLHVETF-LHCVHD 70


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -3

Query: 210  LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
            +W+  APE  + LIWLA HN++PT+ +LH R ++  A C+RC G  +E  LHCVRD
Sbjct: 980  IWQLTAPEKYKLLIWLACHNAAPTLSLLHHRKMAPAATCSRC-GENDESFLHCVRD 1034



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -2

Query: 460  NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLH-YGSPIWNSIFKAKEVLKEG 284
            N  +L KLVWDM   ++KLWV +L+ K+  G S L   ++   SP W SI +AK++LK G
Sbjct: 863  NICLLGKLVWDMVQSTNKLWVNLLAKKYSSGTSLLEANVNSNSSPSWFSIIRAKDILKTG 922

Query: 283  YKFR 272
            Y +R
Sbjct: 923  YSWR 926


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 57.8 bits (138), Expect(2) = 3e-08
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -2

Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPL-HYGSPIWNSIFKAKEVLKEG 284
           NT +L KLVW++     KLWV +L+ K+  G + L+  +    SPIW+SI +AK VL  G
Sbjct: 381 NTCLLGKLVWELFHNKHKLWVSLLAAKYTAGPNLLNASITSSSSPIWSSIIRAKNVLISG 440

Query: 283 YKFR 272
           Y +R
Sbjct: 441 YSWR 444



 Score = 25.0 bits (53), Expect(2) = 3e-08
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 267 PVSGDSLFWYSP*MNFGPL 211
           P SG S FW++    FGPL
Sbjct: 445 PGSGSSSFWFTHWSEFGPL 463



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/54 (50%), Positives = 33/54 (61%)
 Frame = -3

Query: 204 KSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
           K    E  +FLIWLA H+S PT  +LH R I   A C RC G+ +E V HC+RD
Sbjct: 556 KKKISEKYKFLIWLACHDSLPTAALLHHRQIIASATCARC-GVSDESVFHCIRD 608


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = -3

Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
           +W    PE  +FLIWLA  N  PT+ +LHRR I+    C RC G  +E  LHCVRD
Sbjct: 123 IWNLQVPEKYKFLIWLACQNVVPTLSLLHRRNIAPSPTCARC-GEEDETFLHCVRD 177


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -3

Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRDFLY 34
           +WK    E ++F++WLA HNS  T+ +L+   IS    C RC GI  E  LHCVRD ++
Sbjct: 22  IWKLKLLEKIKFILWLACHNSVHTISLLNHGNISHSTVCNRC-GIHNETFLHCVRDCIH 79