BLASTX nr result

ID: Glycyrrhiza23_contig00032635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032635
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   167   6e-40
ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   160   1e-37
ref|XP_003533303.1| PREDICTED: probable cyclic nucleotide-gated ...   157   8e-37
ref|XP_003549190.1| PREDICTED: probable cyclic nucleotide-gated ...   152   3e-35
ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago tr...   149   2e-34

>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 766

 Score =  167 bits (424), Expect = 6e-40
 Identities = 83/120 (69%), Positives = 93/120 (77%)
 Frame = +3

Query: 3   VNQCLRDACHKSNITGCMKLIDCXXXXXXXXXXXXTSNQWSSNVDAINCLNPPSEGGFPY 182
           VNQCLRDACH SNI GCMK IDC             S+QW +N DA+ CL+P S  GF Y
Sbjct: 392 VNQCLRDACHSSNIPGCMKFIDCGRGHGKNQPSLR-SDQWINNTDAVACLDP-SPDGFSY 449

Query: 183 GIYADAVPLTMETNVINKYVYSLFWGFQQISTLAGNLVPSYFLGEVLFTMFIIGLGLLLF 362
           GIY +AVPLT+ETN++NKYVYSLFWGFQQISTLAGNL PSYF+ EVLFTM IIG+GLLLF
Sbjct: 450 GIYENAVPLTIETNIVNKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAIIGMGLLLF 509


>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 766

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/120 (67%), Positives = 90/120 (75%)
 Frame = +3

Query: 3   VNQCLRDACHKSNITGCMKLIDCXXXXXXXXXXXXTSNQWSSNVDAINCLNPPSEGGFPY 182
           VNQCLRDACH SNI  CMK IDC             S+QW +N  A+ CL+P S  GF Y
Sbjct: 392 VNQCLRDACHSSNIPECMKFIDCGRGHGNNQPGLR-SDQWINNTQAVACLDP-SPDGFSY 449

Query: 183 GIYADAVPLTMETNVINKYVYSLFWGFQQISTLAGNLVPSYFLGEVLFTMFIIGLGLLLF 362
           GIY +AVPLT+ETNV+ KYVYSLFWGFQQISTLAGNL PSYF+ EVLFTM IIG+GLLLF
Sbjct: 450 GIYENAVPLTIETNVVKKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAIIGMGLLLF 509


>ref|XP_003533303.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 774

 Score =  157 bits (397), Expect = 8e-37
 Identities = 81/121 (66%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   VNQCLRDACHKSNITGCMKLIDCXXXXXXXXXXXX-TSNQWSSNVDAINCLNPPSEGGFP 179
           VNQCLRDAC  S+I  CM +IDC             TS+ WS+N DAI CLNP S  GF 
Sbjct: 393 VNQCLRDACGNSDIDRCMTVIDCGRHGHTRNNYSDQTSSLWSNNSDAIACLNP-SSSGFR 451

Query: 180 YGIYADAVPLTMETNVINKYVYSLFWGFQQISTLAGNLVPSYFLGEVLFTMFIIGLGLLL 359
           YGIY + VPLT+ET+V NKY+YSLFWGFQQISTLAG+L PSYF GEVLFTM IIGLGLLL
Sbjct: 452 YGIYVNGVPLTIETSVANKYIYSLFWGFQQISTLAGSLTPSYFWGEVLFTMAIIGLGLLL 511

Query: 360 F 362
           F
Sbjct: 512 F 512


>ref|XP_003549190.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 747

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/120 (59%), Positives = 87/120 (72%)
 Frame = +3

Query: 3   VNQCLRDACHKSNITGCMKLIDCXXXXXXXXXXXXTSNQWSSNVDAINCLNPPSEGGFPY 182
           VNQC R+ACH SNI GC+  IDC            +SNQW++++DAI C N  S G F Y
Sbjct: 371 VNQCFRNACHTSNIPGCLTFIDCGHSHNGHNQPGLSSNQWNNHIDAIACWNSSSGGSFAY 430

Query: 183 GIYADAVPLTMETNVINKYVYSLFWGFQQISTLAGNLVPSYFLGEVLFTMFIIGLGLLLF 362
           GIYA+AVPLT +T+++ KY+Y+LFWG QQISTLAGN  PS F+ EVLFTM I+GLGL LF
Sbjct: 431 GIYANAVPLTTQTDMVIKYIYALFWGLQQISTLAGNQTPSDFVWEVLFTMAIVGLGLFLF 490


>ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago truncatula]
           gi|355512177|gb|AES93800.1| Cyclic nucleotide gated
           channel [Medicago truncatula]
          Length = 742

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/120 (63%), Positives = 91/120 (75%)
 Frame = +3

Query: 3   VNQCLRDACHKSNITGCMKLIDCXXXXXXXXXXXXTSNQWSSNVDAINCLNPPSEGGFPY 182
           VNQCLRDAC  +N+TGCM+LIDC            ++  W ++  A +CLN  S G F Y
Sbjct: 370 VNQCLRDACRNANLTGCMELIDCN-----------SNATWRNDKGANDCLNS-SSGVFSY 417

Query: 183 GIYADAVPLTMETNVINKYVYSLFWGFQQISTLAGNLVPSYFLGEVLFTMFIIGLGLLLF 362
           GIYA+AVPLT+ET VI+KYVY+LFWGFQQIST+AGN VPSYF+ EVLFTM IIGLGLLL+
Sbjct: 418 GIYANAVPLTIETRVISKYVYALFWGFQQISTMAGNQVPSYFVWEVLFTMSIIGLGLLLY 477


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