BLASTX nr result

ID: Glycyrrhiza23_contig00032624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032624
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40149.1| unknown [Medicago truncatula]                          217   1e-54
ref|XP_003606781.1| Copper transporter [Medicago truncatula] gi|...   209   3e-52
ref|NP_001238742.1| uncharacterized protein LOC100306175 [Glycin...   203   2e-50
ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   162   3e-38
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   148   8e-34

>gb|AFK40149.1| unknown [Medicago truncatula]
          Length = 164

 Score =  217 bits (552), Expect = 1e-54
 Identities = 113/153 (73%), Positives = 127/153 (83%), Gaps = 6/153 (3%)
 Frame = -2

Query: 441 HMPGMDGMAMSPKAXXXXSN-GTTIMMGHKMH----MTFFWGKDALILFDNWPAGKTGMY 277
           H  GM+GM M PK+    S+   T+MMGHKMH    MTFFWGKDALILF+NWP G TGMY
Sbjct: 8   HGGGMEGMTMPPKSPPSSSSTNNTMMMGHKMHGMMHMTFFWGKDALILFNNWPNGDTGMY 67

Query: 276 VLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNGG 97
           VLALI+VFVM++L+ELLSRTRFIK  SN  AAGL QTLLH++RVGL+YLVMLALMSFNGG
Sbjct: 68  VLALILVFVMAVLIELLSRTRFIKPGSNHVAAGLFQTLLHVLRVGLAYLVMLALMSFNGG 127

Query: 96  VFLVAVLGHALGFFLCSRAFKKP-HHDEGFDLP 1
           VFLVAVLGHALGFFLCS AF+KP  HDE +DLP
Sbjct: 128 VFLVAVLGHALGFFLCSSAFRKPKQHDEAYDLP 160


>ref|XP_003606781.1| Copper transporter [Medicago truncatula]
           gi|355507836|gb|AES88978.1| Copper transporter [Medicago
           truncatula]
          Length = 307

 Score =  209 bits (532), Expect = 3e-52
 Identities = 110/156 (70%), Positives = 123/156 (78%), Gaps = 3/156 (1%)
 Frame = -2

Query: 459 DTDMDEHMPGMDGMAMSPKAXXXXSNGTTIMMGHK---MHMTFFWGKDALILFDNWPAGK 289
           D DMD       GMAM+PK+    ++  T+MMG     MHMTFFWGKDALILFDNWPAG 
Sbjct: 2   DHDMDH------GMAMAPKSSSSTND--TMMMGQMHDMMHMTFFWGKDALILFDNWPAGN 53

Query: 288 TGMYVLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMS 109
           +G YVLALI+VF MS+L+E LS TRFIK  SN   AGLVQTLLH++RVGL+YLVMLALMS
Sbjct: 54  SGKYVLALILVFAMSILIEFLSSTRFIKPGSNPIVAGLVQTLLHVLRVGLAYLVMLALMS 113

Query: 108 FNGGVFLVAVLGHALGFFLCSRAFKKPHHDEGFDLP 1
           FNGGVFLVAVLGHA+GFF  SRAFKKPH DE FDLP
Sbjct: 114 FNGGVFLVAVLGHAVGFFFRSRAFKKPHQDENFDLP 149



 Score =  186 bits (471), Expect = 3e-45
 Identities = 94/140 (67%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
 Frame = -2

Query: 429 MDGMAMSPKAXXXXSNGTTIMMGHKM----HMTFFWGKDALILFDNWPAGKTGMYVLALI 262
           MD M+M+PK+     N +T+MM  KM    HMTFFWGKD+LILF+NWPAG T  YV+AL 
Sbjct: 167 MDEMSMAPKSSSS--NNSTMMMSLKMQGMIHMTFFWGKDSLILFNNWPAGNTSKYVMALF 224

Query: 261 VVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNGGVFLVA 82
           ++F+ S+L+ELLS T F K  SN   AGLVQTLLH++RVGL+YL+MLALMSFNGGVFLV 
Sbjct: 225 MIFIASMLMELLSYTPF-KPGSNRMVAGLVQTLLHVLRVGLAYLIMLALMSFNGGVFLVV 283

Query: 81  VLGHALGFFLCSRAFKKPHH 22
           VLGHALGFF+CSRAFK+PHH
Sbjct: 284 VLGHALGFFVCSRAFKEPHH 303


>ref|NP_001238742.1| uncharacterized protein LOC100306175 [Glycine max]
           gi|255627769|gb|ACU14229.1| unknown [Glycine max]
          Length = 155

 Score =  203 bits (516), Expect = 2e-50
 Identities = 106/153 (69%), Positives = 123/153 (80%), Gaps = 4/153 (2%)
 Frame = -2

Query: 447 DEHMPGMDGMAMSPKAXXXXSNGTTI--MMGHKM--HMTFFWGKDALILFDNWPAGKTGM 280
           D HM GM GM  +P +     NGTT+  MM HKM  HMTFFWGKDA ILF+NWP GK+GM
Sbjct: 3   DGHMHGMGGMVPTPPST----NGTTMTMMMHHKMMMHMTFFWGKDADILFNNWPGGKSGM 58

Query: 279 YVLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNG 100
           YVLAL+ VFVM++LVELLS TRFIK  SN   +GL++TLLH++RVGL+YLVMLALMSFNG
Sbjct: 59  YVLALVFVFVMAVLVELLSHTRFIKPGSNHVVSGLIKTLLHVLRVGLAYLVMLALMSFNG 118

Query: 99  GVFLVAVLGHALGFFLCSRAFKKPHHDEGFDLP 1
           GVFLVAVLGHALGFF+ + AF KP  +EGFDLP
Sbjct: 119 GVFLVAVLGHALGFFVSTVAFNKPPQNEGFDLP 151


>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  162 bits (411), Expect = 3e-38
 Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
 Frame = -2

Query: 453 DMDEHMPGMDGMAMSPKAXXXXSNGTTIMMGHKM--HMTFFWGKDALILFDNWPAGKTGM 280
           D D H+PGM     +P       NGT   M HKM  HMTFFWGKD LILF  WP   TGM
Sbjct: 2   DPDHHLPGMSPPPSTPM------NGTD-GMDHKMMTHMTFFWGKDTLILFSGWPGTSTGM 54

Query: 279 YVLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNG 100
           YVLAL+ +FV+++LVE LS  R +K  SN  AAGL+Q L+H VRVGL+Y+VMLA+MSFNG
Sbjct: 55  YVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQALMHAVRVGLAYMVMLAVMSFNG 114

Query: 99  GVFLVAVLGHALGFFLC-SRAFK---KPHHDEGFDLP 1
           GVF+VAV GH +GFF+  SR FK    P + +  DLP
Sbjct: 115 GVFIVAVAGHLVGFFIFGSRVFKDTEMPPYHKTSDLP 151


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  148 bits (373), Expect = 8e-34
 Identities = 76/125 (60%), Positives = 88/125 (70%)
 Frame = -2

Query: 426 DGMAMSPKAXXXXSNGTTIMMGHKMHMTFFWGKDALILFDNWPAGKTGMYVLALIVVFVM 247
           D M MSP             M   MHMTF+WGK+A ILF  WP  ++GMY LALIVVFVM
Sbjct: 6   DHMHMSPPPANSTGMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVM 65

Query: 246 SLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNGGVFLVAVLGHA 67
            ++VE LS  R IK  S   AAGLVQTLLH +R+GL+Y+VMLALMSFNGGVFLVAV GHA
Sbjct: 66  GIIVEWLSYCRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHA 125

Query: 66  LGFFL 52
           +GF +
Sbjct: 126 VGFLV 130


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