BLASTX nr result
ID: Glycyrrhiza23_contig00032621
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00032621 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818... 131 6e-29 ref|XP_003616296.1| DNA repair protein complementing XP-C cells-... 111 5e-23 ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-16 emb|CBI33509.3| unnamed protein product [Vitis vinifera] 88 6e-16 ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 88 8e-16 >ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818100 [Glycine max] Length = 926 Score = 131 bits (329), Expect = 6e-29 Identities = 71/99 (71%), Positives = 77/99 (77%) Frame = -2 Query: 302 KNCTNEEKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKPDQSS 123 KNCTN E PHF LASALE EGS EEIAALSVAL RALNLTARFVSILDVA LKP Q Sbjct: 236 KNCTNRETSPHFGLASALESHEGSSEEIAALSVALLRALNLTARFVSILDVAPLKPVQ-- 293 Query: 122 RPAASGSSKGIFNTYTPMVSKQKLDFKSPKKPVSLSSYE 6 ASGSS GIF T TPM+SK+KLDFKSP++ +S + E Sbjct: 294 --VASGSSNGIFKTSTPMISKRKLDFKSPQESISCNEIE 330 >ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago truncatula] gi|355517631|gb|AES99254.1| DNA repair protein complementing XP-C cells-like protein [Medicago truncatula] Length = 1052 Score = 111 bits (278), Expect = 5e-23 Identities = 61/75 (81%), Positives = 65/75 (86%) Frame = -2 Query: 227 EEIAALSVALFRALNLTARFVSILDVASLKPDQSSRPAASGSSKGIFNTYTPMVSKQKLD 48 + IAALSVALFRALNLTARFVSILDV+SLKP QS +P ASGSSKGIF T TPMVSKQKLD Sbjct: 385 KHIAALSVALFRALNLTARFVSILDVSSLKPGQSFKPMASGSSKGIFGTSTPMVSKQKLD 444 Query: 47 FKSPKKPVSLSSYER 3 FKSPKK + SYER Sbjct: 445 FKSPKKSL---SYER 456 Score = 55.5 bits (132), Expect = 5e-06 Identities = 26/31 (83%), Positives = 26/31 (83%) Frame = -2 Query: 302 KNCTNEEKPPHFALASALELREGSPEEIAAL 210 KNCTN EK PHFALASALELREGSPEE L Sbjct: 222 KNCTNGEKSPHFALASALELREGSPEEFEVL 252 >ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1| predicted protein [Populus trichocarpa] Length = 868 Score = 89.0 bits (219), Expect = 4e-16 Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 4/100 (4%) Frame = -2 Query: 290 NEEKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKPDQSSRPAA 111 +E++ H AL+ ALE REG+ EE+AALSVALFRAL LT RFVSILDVAS+KPD + Sbjct: 198 SEKRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKPDADKYESL 257 Query: 110 S-GSSK---GIFNTYTPMVSKQKLDFKSPKKPVSLSSYER 3 S G+SK GIFNT T MV + K F PK SLS E+ Sbjct: 258 SQGTSKMHRGIFNTSTLMVDRPKEVFIPPK---SLSCNEK 294 >emb|CBI33509.3| unnamed protein product [Vitis vinifera] Length = 866 Score = 88.2 bits (217), Expect = 6e-16 Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 4/88 (4%) Frame = -2 Query: 284 EKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKP----DQSSRP 117 E+P H +LA ALE EG+PEE+AALSVALFRALNLT RFVSILDVA LKP +S+ Sbjct: 250 ERPLHSSLAFALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQ 309 Query: 116 AASGSSKGIFNTYTPMVSKQKLDFKSPK 33 A+ +S GIF+ T MV+++ SPK Sbjct: 310 NANRASGGIFDNSTLMVARKNQVSSSPK 337 >ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis vinifera] Length = 1103 Score = 87.8 bits (216), Expect = 8e-16 Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 4/92 (4%) Frame = -2 Query: 284 EKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKP----DQSSRP 117 E+P H +LA ALE EG+PEE+AALSVALFRALNLT RFVSILDVA LKP +S+ Sbjct: 410 ERPLHSSLAFALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQ 469 Query: 116 AASGSSKGIFNTYTPMVSKQKLDFKSPKKPVS 21 A+ +S GIF+ T MV+++ SP K S Sbjct: 470 NANRASGGIFDNSTLMVARKNQVSSSPVKSSS 501