BLASTX nr result

ID: Glycyrrhiza23_contig00032621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032621
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818...   131   6e-29
ref|XP_003616296.1| DNA repair protein complementing XP-C cells-...   111   5e-23
ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
emb|CBI33509.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ...    88   8e-16

>ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818100 [Glycine max]
          Length = 926

 Score =  131 bits (329), Expect = 6e-29
 Identities = 71/99 (71%), Positives = 77/99 (77%)
 Frame = -2

Query: 302 KNCTNEEKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKPDQSS 123
           KNCTN E  PHF LASALE  EGS EEIAALSVAL RALNLTARFVSILDVA LKP Q  
Sbjct: 236 KNCTNRETSPHFGLASALESHEGSSEEIAALSVALLRALNLTARFVSILDVAPLKPVQ-- 293

Query: 122 RPAASGSSKGIFNTYTPMVSKQKLDFKSPKKPVSLSSYE 6
              ASGSS GIF T TPM+SK+KLDFKSP++ +S +  E
Sbjct: 294 --VASGSSNGIFKTSTPMISKRKLDFKSPQESISCNEIE 330


>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
           truncatula] gi|355517631|gb|AES99254.1| DNA repair
           protein complementing XP-C cells-like protein [Medicago
           truncatula]
          Length = 1052

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/75 (81%), Positives = 65/75 (86%)
 Frame = -2

Query: 227 EEIAALSVALFRALNLTARFVSILDVASLKPDQSSRPAASGSSKGIFNTYTPMVSKQKLD 48
           + IAALSVALFRALNLTARFVSILDV+SLKP QS +P ASGSSKGIF T TPMVSKQKLD
Sbjct: 385 KHIAALSVALFRALNLTARFVSILDVSSLKPGQSFKPMASGSSKGIFGTSTPMVSKQKLD 444

Query: 47  FKSPKKPVSLSSYER 3
           FKSPKK +   SYER
Sbjct: 445 FKSPKKSL---SYER 456



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = -2

Query: 302 KNCTNEEKPPHFALASALELREGSPEEIAAL 210
           KNCTN EK PHFALASALELREGSPEE   L
Sbjct: 222 KNCTNGEKSPHFALASALELREGSPEEFEVL 252


>ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1|
           predicted protein [Populus trichocarpa]
          Length = 868

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
 Frame = -2

Query: 290 NEEKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKPDQSSRPAA 111
           +E++  H AL+ ALE REG+ EE+AALSVALFRAL LT RFVSILDVAS+KPD     + 
Sbjct: 198 SEKRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKPDADKYESL 257

Query: 110 S-GSSK---GIFNTYTPMVSKQKLDFKSPKKPVSLSSYER 3
           S G+SK   GIFNT T MV + K  F  PK   SLS  E+
Sbjct: 258 SQGTSKMHRGIFNTSTLMVDRPKEVFIPPK---SLSCNEK 294


>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
          Length = 866

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
 Frame = -2

Query: 284 EKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKP----DQSSRP 117
           E+P H +LA ALE  EG+PEE+AALSVALFRALNLT RFVSILDVA LKP     +S+  
Sbjct: 250 ERPLHSSLAFALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQ 309

Query: 116 AASGSSKGIFNTYTPMVSKQKLDFKSPK 33
            A+ +S GIF+  T MV+++     SPK
Sbjct: 310 NANRASGGIFDNSTLMVARKNQVSSSPK 337


>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
           vinifera]
          Length = 1103

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
 Frame = -2

Query: 284 EKPPHFALASALELREGSPEEIAALSVALFRALNLTARFVSILDVASLKP----DQSSRP 117
           E+P H +LA ALE  EG+PEE+AALSVALFRALNLT RFVSILDVA LKP     +S+  
Sbjct: 410 ERPLHSSLAFALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQ 469

Query: 116 AASGSSKGIFNTYTPMVSKQKLDFKSPKKPVS 21
            A+ +S GIF+  T MV+++     SP K  S
Sbjct: 470 NANRASGGIFDNSTLMVARKNQVSSSPVKSSS 501


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