BLASTX nr result

ID: Glycyrrhiza23_contig00032607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032607
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...   192   2e-47
ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   187   1e-45
ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
emb|CBI21289.3| unnamed protein product [Vitis vinifera]              173   1e-41

>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499496|gb|AES80699.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/104 (89%), Positives = 99/104 (95%)
 Frame = +1

Query: 1   VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180
           VE KGR+HVFLVGDKEHPQHEKIYEY D+LNVKLQE+GYMPNV SVL+DVD EEKGMVLR
Sbjct: 543 VEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLR 602

Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312
           VHSEKLA+AFGIMNSVPGS+IQIIKNLRICGDCH AIKLISKIV
Sbjct: 603 VHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIV 646


>ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g26782, mitochondrial-like [Glycine max]
          Length = 555

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/104 (87%), Positives = 95/104 (91%)
 Frame = +1

Query: 1   VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180
           VELKGRIHV LVGDKEHPQHEKIYEY DK NVKLQELGYMPN   VLHDVDEEEKGMVLR
Sbjct: 426 VELKGRIHVLLVGDKEHPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLR 485

Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312
           VHSEKLA+AFGIMNSVPGSII IIKNLRICGDC++ IKLI K+V
Sbjct: 486 VHSEKLAVAFGIMNSVPGSIIHIIKNLRICGDCNVVIKLIFKVV 529


>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/104 (79%), Positives = 97/104 (93%)
 Frame = +1

Query: 1   VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180
           VELKGR+HVFLVGDKEHPQHEKIY+Y ++L+VKLQE GY+PN+ASVLHDVDEEEK M++R
Sbjct: 537 VELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVR 596

Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312
           VHSEKLA+AFG+MNS+PGS I +IKNLR+CGDCH  IKLISKIV
Sbjct: 597 VHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIV 640


>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/104 (76%), Positives = 95/104 (91%)
 Frame = +1

Query: 1   VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180
           V++KGR+HVFLVGD+EHPQHEKIYEY +KL++KLQE+GY+P++ SVLHDV  EEK MVLR
Sbjct: 606 VDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLR 665

Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312
           VHSEKLA+AFGIMN+VPG+ I IIKNLR+CGDCH AIK ISKIV
Sbjct: 666 VHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIV 709


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/104 (76%), Positives = 95/104 (91%)
 Frame = +1

Query: 1   VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180
           V++KGR+HVFLVGD+EHPQHEKIYEY +KL++KLQE+GY+P++ SVLHDV  EEK MVLR
Sbjct: 452 VDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLR 511

Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312
           VHSEKLA+AFGIMN+VPG+ I IIKNLR+CGDCH AIK ISKIV
Sbjct: 512 VHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIV 555


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