BLASTX nr result
ID: Glycyrrhiza23_contig00032607
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00032607 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ... 192 2e-47 ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 187 1e-45 ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2... 181 4e-44 ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi... 173 1e-41 emb|CBI21289.3| unnamed protein product [Vitis vinifera] 173 1e-41 >ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula] gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 672 Score = 192 bits (488), Expect = 2e-47 Identities = 93/104 (89%), Positives = 99/104 (95%) Frame = +1 Query: 1 VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180 VE KGR+HVFLVGDKEHPQHEKIYEY D+LNVKLQE+GYMPNV SVL+DVD EEKGMVLR Sbjct: 543 VEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLR 602 Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312 VHSEKLA+AFGIMNSVPGS+IQIIKNLRICGDCH AIKLISKIV Sbjct: 603 VHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIV 646 >ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Glycine max] Length = 555 Score = 187 bits (474), Expect = 1e-45 Identities = 91/104 (87%), Positives = 95/104 (91%) Frame = +1 Query: 1 VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180 VELKGRIHV LVGDKEHPQHEKIYEY DK NVKLQELGYMPN VLHDVDEEEKGMVLR Sbjct: 426 VELKGRIHVLLVGDKEHPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLR 485 Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312 VHSEKLA+AFGIMNSVPGSII IIKNLRICGDC++ IKLI K+V Sbjct: 486 VHSEKLAVAFGIMNSVPGSIIHIIKNLRICGDCNVVIKLIFKVV 529 >ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa] Length = 666 Score = 181 bits (460), Expect = 4e-44 Identities = 83/104 (79%), Positives = 97/104 (93%) Frame = +1 Query: 1 VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180 VELKGR+HVFLVGDKEHPQHEKIY+Y ++L+VKLQE GY+PN+ASVLHDVDEEEK M++R Sbjct: 537 VELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVR 596 Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312 VHSEKLA+AFG+MNS+PGS I +IKNLR+CGDCH IKLISKIV Sbjct: 597 VHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIV 640 >ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Vitis vinifera] Length = 735 Score = 173 bits (439), Expect = 1e-41 Identities = 80/104 (76%), Positives = 95/104 (91%) Frame = +1 Query: 1 VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180 V++KGR+HVFLVGD+EHPQHEKIYEY +KL++KLQE+GY+P++ SVLHDV EEK MVLR Sbjct: 606 VDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLR 665 Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312 VHSEKLA+AFGIMN+VPG+ I IIKNLR+CGDCH AIK ISKIV Sbjct: 666 VHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIV 709 >emb|CBI21289.3| unnamed protein product [Vitis vinifera] Length = 581 Score = 173 bits (439), Expect = 1e-41 Identities = 80/104 (76%), Positives = 95/104 (91%) Frame = +1 Query: 1 VELKGRIHVFLVGDKEHPQHEKIYEYWDKLNVKLQELGYMPNVASVLHDVDEEEKGMVLR 180 V++KGR+HVFLVGD+EHPQHEKIYEY +KL++KLQE+GY+P++ SVLHDV EEK MVLR Sbjct: 452 VDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLR 511 Query: 181 VHSEKLAIAFGIMNSVPGSIIQIIKNLRICGDCHIAIKLISKIV 312 VHSEKLA+AFGIMN+VPG+ I IIKNLR+CGDCH AIK ISKIV Sbjct: 512 VHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIV 555