BLASTX nr result

ID: Glycyrrhiza23_contig00032588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032588
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540841.1| PREDICTED: glutamate receptor 3.4-like [Glyc...   163   2e-38
ref|XP_003527492.1| PREDICTED: glutamate receptor 3.4-like [Glyc...   155   3e-36
ref|XP_002301627.1| glutamate-gated kainate-type ion channel rec...   143   1e-32
ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinu...   143   2e-32
ref|XP_002321123.1| glutamate-gated kainate-type ion channel rec...   141   6e-32

>ref|XP_003540841.1| PREDICTED: glutamate receptor 3.4-like [Glycine max]
          Length = 924

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/100 (74%), Positives = 85/100 (85%)
 Frame = -3

Query: 301 FLQTVLRMNFTGLSGQIEFDMDRNLIHPAYDILNIGGNESRGIGYWSNHSGLSVIAPEIL 122
           FL+T+L MNFTGLSGQ+EFDMD+NL+HPAYDILNIGG+ SR IGYWSNHSGLSVIAPE+L
Sbjct: 381 FLKTILGMNFTGLSGQVEFDMDKNLVHPAYDILNIGGSGSRRIGYWSNHSGLSVIAPEVL 440

Query: 121 YMEKXXXXXXXXSQELKSVVWPGEAATAPRGWVFPNNGKP 2
           Y +K        +QEL SV+WPGEA T PRGWVFPNNG+P
Sbjct: 441 YEKKSSKTSLKSNQELYSVIWPGEATTTPRGWVFPNNGQP 480


>ref|XP_003527492.1| PREDICTED: glutamate receptor 3.4-like [Glycine max]
          Length = 929

 Score =  155 bits (392), Expect = 3e-36
 Identities = 70/100 (70%), Positives = 83/100 (83%)
 Frame = -3

Query: 301 FLQTVLRMNFTGLSGQIEFDMDRNLIHPAYDILNIGGNESRGIGYWSNHSGLSVIAPEIL 122
           FL+T+L MNFTGLSGQ+EFDM++NL+ PAYDILNIGG+ S  IGYWSNHSGLSVIAPE+L
Sbjct: 384 FLKTILGMNFTGLSGQVEFDMEKNLVRPAYDILNIGGSGSHRIGYWSNHSGLSVIAPEVL 443

Query: 121 YMEKXXXXXXXXSQELKSVVWPGEAATAPRGWVFPNNGKP 2
           Y +K        +Q+L SV+WPGEA T PRGWVFPNNG+P
Sbjct: 444 YEKKPSKTSLKSNQQLYSVIWPGEATTTPRGWVFPNNGQP 483


>ref|XP_002301627.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222843353|gb|EEE80900.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 956

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/100 (66%), Positives = 78/100 (78%)
 Frame = -3

Query: 301 FLQTVLRMNFTGLSGQIEFDMDRNLIHPAYDILNIGGNESRGIGYWSNHSGLSVIAPEIL 122
           FLQT+LRMNFTGLSGQI+FDMD+NL+HPAYD+LNIGG  SR IGYWS++SGLS + PE+L
Sbjct: 398 FLQTLLRMNFTGLSGQIQFDMDKNLVHPAYDVLNIGGTGSRRIGYWSDYSGLSTVTPEVL 457

Query: 121 YMEKXXXXXXXXSQELKSVVWPGEAATAPRGWVFPNNGKP 2
           Y +         SQ L S +WPGE +  PRGWVFP NGKP
Sbjct: 458 YTK--PKNTSASSQHLYSAIWPGETSLVPRGWVFPENGKP 495


>ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223536548|gb|EEF38194.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 938

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/100 (64%), Positives = 80/100 (80%)
 Frame = -3

Query: 301 FLQTVLRMNFTGLSGQIEFDMDRNLIHPAYDILNIGGNESRGIGYWSNHSGLSVIAPEIL 122
           +LQT+LRMNFTGL+GQI+FD D+NL+HPAYD+LNIGG  SR IGYWSN+SGLS+++PE L
Sbjct: 378 YLQTILRMNFTGLTGQIQFDDDKNLVHPAYDVLNIGGTGSRRIGYWSNYSGLSIVSPETL 437

Query: 121 YMEKXXXXXXXXSQELKSVVWPGEAATAPRGWVFPNNGKP 2
           Y  +        +Q L +V+WPGE+   PRGWVFPNNGKP
Sbjct: 438 Y--EKPPNNSNSNQHLYTVIWPGESTKIPRGWVFPNNGKP 475


>ref|XP_002321123.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222861896|gb|EEE99438.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 927

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/100 (65%), Positives = 78/100 (78%)
 Frame = -3

Query: 301 FLQTVLRMNFTGLSGQIEFDMDRNLIHPAYDILNIGGNESRGIGYWSNHSGLSVIAPEIL 122
           FLQT+LRMNF+G SGQI+FD+DRNL+ PAYD+LNIGG  SR IGYWSN+SGLS I+PE+L
Sbjct: 368 FLQTLLRMNFSGPSGQIQFDLDRNLVRPAYDVLNIGGTGSRRIGYWSNYSGLSTISPEVL 427

Query: 121 YMEKXXXXXXXXSQELKSVVWPGEAATAPRGWVFPNNGKP 2
           Y +         +Q L SV+WPGE +  PRGWVFP NGKP
Sbjct: 428 YTK--PRNNSSSNQHLSSVIWPGETSLVPRGWVFPENGKP 465


Top