BLASTX nr result
ID: Glycyrrhiza23_contig00032559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00032559
(342 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containi... 191 7e-47
emb|CBI19924.3| unnamed protein product [Vitis vinifera] 170 1e-40
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi... 170 1e-40
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,... 157 1e-36
ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2... 154 6e-36
>ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Glycine max]
Length = 698
Score = 191 bits (484), Expect = 7e-47
Identities = 91/114 (79%), Positives = 99/114 (86%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKYTFGTLL 180
GNLNS RVWFNQMS+ RDRVSWNALL+ YG HQLS+QALTMFS+MQWET+PT+YTF TLL
Sbjct: 446 GNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSEQALTMFSKMQWETKPTQYTFVTLL 505
Query: 181 AACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEVLKGA 342
ACANTF L LGKQIHGF+IRHGF ID V R ALV+MY KCRCLEYA EVLK A
Sbjct: 506 LACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVYMYCKCRCLEYAIEVLKRA 559
Score = 65.1 bits (157), Expect = 6e-09
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEM--QWETEPTKYTFGT 174
G + AR F+++ + V+WN ++ Y +K+A+ MFS M P +TF
Sbjct: 212 GVMADARRMFHEIPQ-PNAVTWNVIVRRYLDAGDAKEAVFMFSRMFSTSAVRPMNFTFSN 270
Query: 175 LLAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEV 330
L AC++ AL G QIHG +++ G + D V+ +LV MY KC LE F+V
Sbjct: 271 ALVACSSVSALREGVQIHGVVVKLGLREDNVVSSSLVNMYVKCGRLEDGFQV 322
Score = 62.8 bits (151), Expect = 3e-08
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETE-PTKYTFGTLLA 183
L AR F++M D SWNAL++ Y + ++F M PT+ TF ++LA
Sbjct: 113 LRDARELFDEMPQ-PDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTEVTFASVLA 171
Query: 184 ACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKC 303
+CA + L L KQ+HG + + GF ++++ +LV +Y KC
Sbjct: 172 SCAASSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKC 211
Score = 59.7 bits (143), Expect = 2e-07
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGH-HQLSKQALTMFSEMQWETEPTKYTFGTL 177
G AR +F++M R+ +SWNA+L+ Y + SK ++ + + T G L
Sbjct: 345 GKTLEAREFFDEMPE-RNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLL 403
Query: 178 LAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKC 303
L A +GKQ+HG+I RHGF D+ + +AL+ MY KC
Sbjct: 404 LNVSAGISDHEMGKQVHGYIYRHGFHSDLRLSNALLDMYGKC 445
>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 170 bits (431), Expect = 1e-40
Identities = 77/114 (67%), Positives = 95/114 (83%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKYTFGTLL 180
GNL S R+WF QMS+WRDR+SWNALL+ + H LS++A+T+F EMQWET P+K+T GTLL
Sbjct: 443 GNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWETTPSKFTLGTLL 502
Query: 181 AACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEVLKGA 342
+ACAN FAL GKQIHGF+IR+G++ID+V R ALV MYSKCRCLEYA +V K A
Sbjct: 503 SACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEA 556
Score = 78.6 bits (192), Expect = 5e-13
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQ----WETEPTKYTFGT 174
L+ AR F +M RD SWNA+++ Y +++AL +FS M W E TF +
Sbjct: 111 LDDARELFEEMPQ-RDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANE---ITFAS 166
Query: 175 LLAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYA 321
+L +CA AL+L KQIHG I+++GF ++++ +LV +Y KCR + A
Sbjct: 167 VLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDA 215
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKY-TFGTL 177
G ARV F++M R +SWNA+L+ Y H ++AL M+ T+ + T G +
Sbjct: 342 GQTREARVLFDEMPE-RSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLI 400
Query: 178 LAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKC 303
L CA + GKQ+HGFI RHG ++ + +AL+ MY KC
Sbjct: 401 LNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKC 442
Score = 67.8 bits (164), Expect = 9e-10
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEM-QWETEPTKYTFGTLLA 183
++ AR F+++ N + +SWN ++ Y K+A+ MF +M + P +TF L
Sbjct: 212 MSDARRMFDEIEN-PNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALI 270
Query: 184 ACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEVLK 336
AC++ AL G QIHG IR G+ D V+ +L+ MY+KC LE A + +
Sbjct: 271 ACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFE 321
>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 170 bits (431), Expect = 1e-40
Identities = 77/114 (67%), Positives = 95/114 (83%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKYTFGTLL 180
GNL S R+WF QMS+WRDR+SWNALL+ + H LS++A+T+F EMQWET P+K+T GTLL
Sbjct: 443 GNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWETTPSKFTLGTLL 502
Query: 181 AACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEVLKGA 342
+ACAN FAL GKQIHGF+IR+G++ID+V R ALV MYSKCRCLEYA +V K A
Sbjct: 503 SACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEA 556
Score = 78.6 bits (192), Expect = 5e-13
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQ----WETEPTKYTFGT 174
L+ AR F +M RD SWNA+++ Y +++AL +FS M W E TF +
Sbjct: 111 LDDARELFEEMPQ-RDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANE---ITFAS 166
Query: 175 LLAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYA 321
+L +CA AL+L KQIHG I+++GF ++++ +LV +Y KCR + A
Sbjct: 167 VLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDA 215
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKY-TFGTL 177
G ARV F++M R +SWNA+L+ Y H ++AL M+ T+ + T G +
Sbjct: 342 GQTREARVLFDEMPE-RSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLI 400
Query: 178 LAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKC 303
L CA + GKQ+HGFI RHG ++ + +AL+ MY KC
Sbjct: 401 LNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKC 442
Score = 67.8 bits (164), Expect = 9e-10
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEM-QWETEPTKYTFGTLLA 183
++ AR F+++ N + +SWN ++ Y K+A+ MF +M + P +TF L
Sbjct: 212 MSDARRMFDEIEN-PNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALI 270
Query: 184 ACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEVLK 336
AC++ AL G QIHG IR G+ D V+ +L+ MY+KC LE A + +
Sbjct: 271 ACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFE 321
>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 718
Score = 157 bits (396), Expect = 1e-36
Identities = 74/114 (64%), Positives = 87/114 (76%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKYTFGTLL 180
GNL SARVWF QMS RD +SWNALL+ Y H S+QA+ +F EMQWET+P+ +TFGTLL
Sbjct: 440 GNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMIFGEMQWETKPSTFTFGTLL 499
Query: 181 AACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEVLKGA 342
AACAN FAL GK+IHGF+IR+G+ +D VI ALV MYSKCRCL YA V A
Sbjct: 500 AACANIFALDQGKEIHGFMIRNGYNLDTVISGALVDMYSKCRCLSYALTVFNRA 553
Score = 70.9 bits (172), Expect = 1e-10
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKY-TFGTL 177
G AR F +M W VSWNA+L+ Y ++AL M+ TE + T G L
Sbjct: 339 GRTREARELFEKMPEW-SVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLL 397
Query: 178 LAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYA 321
L CA + +GKQ HGFI RHGF I++ +AL+ MY KC L A
Sbjct: 398 LNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSA 445
Score = 68.2 bits (165), Expect = 7e-10
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWE-TEPTKYTFGTLLA 183
L AR F++M RD SWNA++ Y +++AL +F +M E + TF ++L
Sbjct: 108 LKDARELFDEMPQ-RDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLK 166
Query: 184 ACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYA 321
+C++ L L +QIHG I++ GF ++++ ALV +Y KC+ + A
Sbjct: 167 SCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEA 212
Score = 66.2 bits (160), Expect = 3e-09
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEM-QWETEPTKYTFGTLLA 183
++ AR+ FN++ N D V+WN ++ Y ++A+ MF +M Q + P +TF L
Sbjct: 209 MSEARLMFNEIENCND-VTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALI 267
Query: 184 ACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYA 321
AC+ AL G QIH F I+ F+ D + +L MY+KC LE A
Sbjct: 268 ACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLESA 313
>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
predicted protein [Populus trichocarpa]
Length = 709
Score = 154 bits (390), Expect = 6e-36
Identities = 74/114 (64%), Positives = 88/114 (77%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKYTFGTLL 180
GNL SA VWF+QM RD VSWN LL+ Y Q+S+QA+++F EMQWET+P K+ F TLL
Sbjct: 440 GNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQAMSIFREMQWETKPHKFIFATLL 499
Query: 181 AACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEVLKGA 342
AACANTFAL GKQIHGF+IR+G+ ID VI AL+ MYSKCRCLEYA V + A
Sbjct: 500 AACANTFALDQGKQIHGFMIRNGYDIDTVIAGALLDMYSKCRCLEYALIVFREA 553
Score = 63.2 bits (152), Expect = 2e-08
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWETEPTKY-TFGTL 177
G + AR F++M R+ VS+NALL+ Y ++AL M TE + TF +
Sbjct: 339 GRMREARELFDEMPE-RNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLM 397
Query: 178 LAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYA 321
L C+ + +GKQ+HGFI RHG+ + VI +AL+ MY KC L A
Sbjct: 398 LNVCSGLSDVDMGKQVHGFIYRHGWLSNTVIGNALLDMYCKCGNLRSA 445
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 7 LNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEMQWE-TEPTKYTFGTLLA 183
L A+ F++M RD SWNA++ ++AL+ F +M + + TF + L
Sbjct: 108 LEDAKELFDEMPQ-RDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALR 166
Query: 184 ACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKC 303
AC + L L +QIHG I+++GF ++++ +LV +Y KC
Sbjct: 167 ACGDVLELCLSRQIHGLIVKYGFCGNVIVGSSLVDVYGKC 206
Score = 57.0 bits (136), Expect = 2e-06
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 GNLNSARVWFNQMSNWRDRVSWNALLSCYGHHQLSKQALTMFSEM-QWETEPTKYTFGTL 177
G ++ +R F+++ N + V+WN ++ Y +A+ MF +M + + P YTF
Sbjct: 207 GAMSESRRIFDEIEN-PNNVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNA 265
Query: 178 LAACANTFALYLGKQIHGFIIRHGFQIDIVIRDALVFMYSKCRCLEYAFEV 330
L AC++ A+ G QIHG + F+ + V+ +L+ MY KC +E A V
Sbjct: 266 LVACSDMRAVKEGMQIHGVATKINFEEEEVVLSSLIDMYVKCGEIESARRV 316