BLASTX nr result

ID: Glycyrrhiza23_contig00032549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032549
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518025.1| PREDICTED: uncharacterized protein LOC100797...   114   6e-24
ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    60   2e-07
ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...    60   2e-07
ref|XP_003569923.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    59   3e-07
emb|CBI39086.3| unnamed protein product [Vitis vinifera]               59   3e-07

>ref|XP_003518025.1| PREDICTED: uncharacterized protein LOC100797919 [Glycine max]
          Length = 360

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/103 (57%), Positives = 74/103 (71%)
 Frame = +2

Query: 2   SAYFKLILINQVDANKSVVKETHQKFNGGYRSWGSLFVNLSDFCDFKQGYLVNDTCIIEA 181
           + +FKL LINQVD NKS+ KET QKFNGGYR WGS F+NL+DF + KQGYLV +TCIIEA
Sbjct: 73  NTFFKLALINQVDRNKSIAKETQQKFNGGYRCWGSFFLNLTDFNNPKQGYLVRNTCIIEA 132

Query: 182 HVCVSDLSTTIQADNLNRITPTNDSKLGDDQATGQISQRQKES 310
           H+CVSDL+  IQ       +P +DS    DQAT + S   +++
Sbjct: 133 HICVSDLAPKIQVH--PNSSPIHDS---CDQATEESSSDDRDT 170


>ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
           sativus]
          Length = 466

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +2

Query: 5   AYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCIIEA 181
           A F L ++NQV    S+ K+T  +FN     WG + F+ LSD  D  +GYLVNDTCI+EA
Sbjct: 114 AQFSLAVVNQVHKKYSIRKDTKHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTCIVEA 173

Query: 182 HVCV 193
            V V
Sbjct: 174 EVLV 177


>ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 12-like [Cucumis sativus]
          Length = 1110

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +2

Query: 5   AYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCIIEA 181
           A F L ++NQV    S+ K+T  +FN     WG + F+ LSD  D  +GYLVNDTCI+EA
Sbjct: 114 AQFSLAVVNQVHKKYSIRKDTKHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTCIVEA 173

Query: 182 HVCV 193
            V V
Sbjct: 174 EVLV 177


>ref|XP_003569923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like
           [Brachypodium distachyon]
          Length = 1085

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +2

Query: 2   SAYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCIIE 178
           SA F L +INQ+D+ +S+ KE    FN     WG + F++L D  D  +GY+VND CIIE
Sbjct: 93  SAQFSLAVINQLDSKQSLRKEATHNFNYRASDWGFTSFMSLMDLYDASKGYVVNDQCIIE 152

Query: 179 AHVCV 193
           A V V
Sbjct: 153 AEVAV 157


>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +2

Query: 5   AYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCIIEA 181
           A F L ++NQ+    S+ K+T  +FN     WG + F+ LSD  D  +GYLVNDTCIIEA
Sbjct: 117 AQFSLSVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLSDLYDPGRGYLVNDTCIIEA 176

Query: 182 HVCV 193
            V V
Sbjct: 177 EVAV 180


Top