BLASTX nr result
ID: Glycyrrhiza23_contig00032525
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00032525
(430 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containi... 174 7e-42
ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi... 171 6e-41
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 170 1e-40
ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
ref|NP_198787.1| pentatricopeptide repeat-containing protein [Ar... 166 2e-39
>ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 174 bits (441), Expect = 7e-42
Identities = 88/145 (60%), Positives = 112/145 (77%), Gaps = 4/145 (2%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHS---VVSAERVFGDMIRNGVSPNV 177
+ KAL +++LANRHGF+P VLSYN++LD++ R S + AERVF DM+RNGVSPNV
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNV 207
Query: 178 YTYNVMIRGVVFN-NLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRT 354
YTYNV+IRGVV +LE G MR+ME++G PN VTYNTLI + CK+K+++EA LLR
Sbjct: 208 YTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRA 267
Query: 355 MAKKGVEPNLISYNAVINGLCGQGK 429
MA GV NLISYN+VINGLCG+G+
Sbjct: 268 MAVGGVAANLISYNSVINGLCGKGR 292
Score = 87.8 bits (216), Expect = 8e-16
Identities = 47/143 (32%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 LIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYT 183
L+++A +++ GFSP V++YN+++ G V A + M+ G+ P+V +
Sbjct: 397 LMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR--VQEAVGILRGMVERGLPPDVVS 454
Query: 184 YNVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMA 360
Y+ +I G L F++ EM KG LP+ VTY++LI C +++L EAF L R M
Sbjct: 455 YSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMM 514
Query: 361 KKGVEPNLISYNAVINGLCGQGK 429
++G+ P+ ++Y ++IN C G+
Sbjct: 515 RRGLPPDEVTYTSLINAYCVDGE 537
Score = 78.6 bits (192), Expect = 5e-13
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +1
Query: 1 KLIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVY 180
K + +A+ ++ G + ++SYNS+++ + G S V + +M G+ P+
Sbjct: 256 KKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVG--ELVEEMRGKGLVPDEV 313
Query: 181 TYNVMIRGVVFN-NLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTM 357
TYN ++ G NL G L+ EM KG PN VTY TLI CK L A + M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373
Query: 358 AKKGVEPNLISYNAVINGLCGQG 426
+G+ PN +Y +I+G C +G
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKG 396
Score = 75.1 bits (183), Expect = 6e-12
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+ +A+ I+ G P V+SY++++ R + A ++ +M+ GV P+ TY
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE--RELGKAFQMKEEMVEKGVLPDTVTY 490
Query: 187 NVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ +I+G+ L F L REM R+G P+ VTY +LI + C + L +A L M +
Sbjct: 491 SSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQ 550
Query: 364 KGVEPNLISYNAVINGL 414
+G P+ ++Y+ +INGL
Sbjct: 551 RGFLPDNVTYSVLINGL 567
Score = 73.6 bits (179), Expect = 2e-11
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Frame = +1
Query: 49 GFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTYNVMIRGVV-FNNLE 225
G P ++YN++++ + G+ + + +M+ G+SPNV TY +I + NL
Sbjct: 307 GLVPDEVTYNTLVNGFCKEGN--LHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364
Query: 226 SGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYNAVI 405
+ +M +G PN TY TLI C++ + EA+ +L M G P++++YNA++
Sbjct: 365 RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424
Query: 406 NGLCGQGK 429
+G C G+
Sbjct: 425 HGYCFLGR 432
Score = 58.5 bits (140), Expect = 5e-07
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Frame = +1
Query: 1 KLIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVY 180
KL++ A ++ R G P ++Y S++++ G S A R+ +M++ G P+
Sbjct: 502 KLVE-AFDLFREMMRRGLPPDEVTYTSLINAYCVDGELS--KALRLHDEMVQRGFLPDNV 558
Query: 181 TYNVMIRGVVFN-NLESGFRLMREMERKGCLPNAVTYNTLIASC---------------C 312
TY+V+I G+ + RL+ ++ + +P+ VTYNTLI +C C
Sbjct: 559 TYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFC 618
Query: 313 KEKRLEEAFGLLRTMAKKGVEPNLISYNAVING 411
+ + EA + +TM ++ +PN YN +I+G
Sbjct: 619 MKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHG 651
Score = 55.8 bits (133), Expect = 3e-06
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +1
Query: 49 GFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTYNVMIRGV-VFNNLE 225
G P ++Y+S++ + +V A +F +M+R G+ P+ TY +I V L
Sbjct: 482 GVLPDTVTYSSLIQGLCLQ--QKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELS 539
Query: 226 SGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYNAVI 405
RL EM ++G LP+ VTY+ LI K+ R + A LL + + P+ ++YN +I
Sbjct: 540 KALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLI 599
>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 171 bits (433), Expect = 6e-41
Identities = 84/142 (59%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
Frame = +1
Query: 4 LIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYT 183
+ID+A+N INLA GF PGVLSYNS+LD+I R +SAE V+ +MIR+ VSPNVYT
Sbjct: 157 MIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYT 216
Query: 184 YNVMIRGVV-FNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMA 360
YN++IRG L+ G EMER GCLPN VTYNTLI + CK R++EAFGLL++M+
Sbjct: 217 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 276
Query: 361 KKGVEPNLISYNAVINGLCGQG 426
KG++PNLISYN +INGLC +G
Sbjct: 277 SKGMQPNLISYNVIINGLCREG 298
Score = 91.7 bits (226), Expect = 6e-17
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+++A+ + G P +Y +++D R G + A R+ +M +G SP+V TY
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN--EAYRILNEMTESGFSPSVVTY 427
Query: 187 NVMIRG-VVFNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
N I G V +E +++EM KG P+ V+Y+T+I+ C++ L+ AF + + M +
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487
Query: 364 KGVEPNLISYNAVINGLC 417
KGV P+ ++Y+++I GLC
Sbjct: 488 KGVSPDAVTYSSLIQGLC 505
Score = 88.6 bits (218), Expect = 5e-16
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Frame = +1
Query: 4 LIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFG---DMIRNGVSPN 174
L+++A I+N GFSP V++YN+ F HG + E G +M+ G++P+
Sbjct: 404 LLNEAYRILNEMTESGFSPSVVTYNA-----FIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Query: 175 VYTYNVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLR 351
V +Y+ +I G L+ F++ +EM KG P+AVTY++LI C+ +RL EA L +
Sbjct: 459 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 518
Query: 352 TMAKKGVEPNLISYNAVINGLCGQG 426
M G+ P+ +Y +IN C +G
Sbjct: 519 EMLDMGLPPDEFTYTTLINAYCVEG 543
Score = 87.8 bits (216), Expect = 8e-16
Identities = 44/130 (33%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +1
Query: 43 RHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTYNVMIRGVVFNNL 222
R+G SP V++Y ++++S+ + + ++ A F M G+ PN TY +I G L
Sbjct: 347 RNGVSPSVVTYTALINSMCK--ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 404
Query: 223 -ESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYNA 399
+R++ EM G P+ VTYN I C +R+EEA G+++ M +KG+ P+++SY+
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464
Query: 400 VINGLCGQGK 429
+I+G C +G+
Sbjct: 465 IISGFCRKGE 474
Score = 79.0 bits (193), Expect = 4e-13
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
ID+A ++ + G P ++SYN I++ + R GS + A + +M G +P+ TY
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS--MKEAWEILEEMGYKGFTPDEVTY 322
Query: 187 NVMIRGVVFN-NLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
N ++ G N + EM R G P+ VTY LI S CK + L A M
Sbjct: 323 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 382
Query: 364 KGVEPNLISYNAVINGLCGQG 426
+G+ PN +Y +I+G QG
Sbjct: 383 RGLRPNERTYTTLIDGFSRQG 403
Score = 74.7 bits (182), Expect = 7e-12
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+++AL ++ G +P V+SY++I+ R G + A ++ +M+ GVSP+ TY
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE--LDRAFQMKQEMVEKGVSPDAVTY 497
Query: 187 NVMIRGVV-FNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ +I+G+ L L +EM G P+ TY TLI + C E L +A L M
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557
Query: 364 KGVEPNLISYNAVINGLCGQGK 429
KG P+ ++Y+ +INGL Q +
Sbjct: 558 KGFLPDAVTYSVLINGLNKQAR 579
>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 170 bits (430), Expect = 1e-40
Identities = 86/143 (60%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 LIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYT 183
LI+KAL+I+NLA +GF PGVLSYN+ILD++ R SV AE +F +M+ +GVSPNVYT
Sbjct: 147 LINKALSIVNLAKSYGFMPGVLSYNAILDAVIRT-KQSVKIAEGIFKEMVESGVSPNVYT 205
Query: 184 YNVMIRGV-VFNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMA 360
YN++IRG NLE G EMER GCLPN VTYNT+I + CK +++ EAF LLR MA
Sbjct: 206 YNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 361 KKGVEPNLISYNAVINGLCGQGK 429
KG+ PNLISYN VINGLC +G+
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQ 288
Score = 91.7 bits (226), Expect = 6e-17
Identities = 42/140 (30%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+++A+ ++ G P +Y +++D + G + A ++ +M+ NG +P + TY
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF--LKQAYQIMKEMVENGFTPTIITY 416
Query: 187 NVMIRG-VVFNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
N +I G + +E L++EM +G +P+ V+Y+T+I+ C+ + LE+AF L M
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476
Query: 364 KGVEPNLISYNAVINGLCGQ 423
KG+ P++ +Y+++I GLC Q
Sbjct: 477 KGISPDVATYSSLIQGLCKQ 496
Score = 81.3 bits (199), Expect = 8e-14
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+ +A I+ +GF+P +++YN++++ G + A + +MI G P+V +Y
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGR--MEDASGLLQEMIERGFIPDVVSY 451
Query: 187 NVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ +I G N LE F+L EM KG P+ TY++LI CK++RL E L + M
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511
Query: 364 KGVEPNLISYNAVINGLCGQG 426
G+ P+ ++Y ++IN C +G
Sbjct: 512 LGLPPDEVTYTSLINAYCIEG 532
Score = 78.2 bits (191), Expect = 7e-13
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSA------------ERV---- 138
I +A ++ L G +P ++SYN +++ + R G S +RV
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 139 -----------------FGDMIRNGVSPNVYTYNVMIRGVV-FNNLESGFRLMREMERKG 264
+M++NG+SPNV TY +I + NL + +M +G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 265 CLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYNAVINGLCGQGK 429
PN TY TLI ++ L++A+ +++ M + G P +I+YNA+ING C G+
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Score = 73.6 bits (179), Expect = 2e-11
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
++ A ++ GF P V+SY++I+ R+ + A ++ +M+ G+SP+V TY
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRN--QELEKAFQLKVEMVAKGISPDVATY 486
Query: 187 NVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ +I+G+ L L +EM G P+ VTY +LI + C E L++A L M +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 364 KGVEPNLISYNAVINGLCGQGK 429
KG P++++YN +ING Q +
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSR 568
Score = 61.6 bits (148), Expect = 6e-08
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = +1
Query: 49 GFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTYNVMIRGV-VFNNLE 225
G SP V +Y+S++ + + V +F +M+ G+ P+ TY +I + +L+
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCD--LFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535
Query: 226 SGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYNAVI 405
RL EM +KG P+ VTYN LI K+ R +EA LL + + PN I+YN +I
Sbjct: 536 KALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Query: 406 N 408
+
Sbjct: 596 D 596
Score = 56.6 bits (135), Expect = 2e-06
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+DKAL + + + GFSP +++YN +++ + A+R+ ++ PN TY
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK--EAKRLLLKLLYEESVPNEITY 591
Query: 187 NVMIRGVVFNNLE--------SGF----------RLMREMERKGCLPNAVTYNTLIASCC 312
N +I NNLE GF R++ M +KG N YN +I
Sbjct: 592 NTLIDNC--NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHS 649
Query: 313 KEKRLEEAFGLLRTMAKKGVEPNLISYNAVINGLCGQGK 429
K +E+A+ L + M G P+ ++ A+ L +GK
Sbjct: 650 KVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
>ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 169 bits (428), Expect = 2e-40
Identities = 86/143 (60%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 LIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYT 183
LI+KAL+I+NLA +GF PGVLSYN+ILD++ R SV AE +F +M+ +GVSPNVYT
Sbjct: 147 LINKALSIVNLAKSYGFMPGVLSYNAILDAVIRT-KQSVKIAEGIFKEMVESGVSPNVYT 205
Query: 184 YNVMIRGV-VFNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMA 360
YN++IRG NLE G EMER GCLPN VTYNT+I + CK +++ EAF LLR MA
Sbjct: 206 YNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 361 KKGVEPNLISYNAVINGLCGQGK 429
KG+ PNLISYN VINGLC +G+
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQ 288
Score = 91.7 bits (226), Expect = 6e-17
Identities = 42/140 (30%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+++A+ ++ G P +Y +++D + G + A ++ +M+ NG +P + TY
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF--LKQAYQIMKEMVENGFTPTIITY 416
Query: 187 NVMIRG-VVFNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
N +I G + +E L++EM +G +P+ V+Y+T+I+ C+ + LE+AF L M
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476
Query: 364 KGVEPNLISYNAVINGLCGQ 423
KG+ P++ +Y+++I GLC Q
Sbjct: 477 KGISPDVATYSSLIQGLCKQ 496
Score = 81.3 bits (199), Expect = 8e-14
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+ +A I+ +GF+P +++YN++++ G + A + +MI G P+V +Y
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGR--MEDASGLLQEMIERGFIPDVVSY 451
Query: 187 NVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ +I G N LE F+L EM KG P+ TY++LI CK++RL E L + M
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511
Query: 364 KGVEPNLISYNAVINGLCGQG 426
G+ P+ ++Y ++IN C +G
Sbjct: 512 LGLPPDEVTYTSLINAYCIEG 532
Score = 78.2 bits (191), Expect = 7e-13
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSA------------ERV---- 138
I +A ++ L G +P ++SYN +++ + R G S +RV
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 139 -----------------FGDMIRNGVSPNVYTYNVMIRGVV-FNNLESGFRLMREMERKG 264
+M++NG+SPNV TY +I + NL + +M +G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 265 CLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYNAVINGLCGQGK 429
PN TY TLI ++ L++A+ +++ M + G P +I+YNA+ING C G+
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Score = 73.6 bits (179), Expect = 2e-11
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
++ A ++ GF P V+SY++I+ R+ + A ++ +M+ G+SP+V TY
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRN--QELEKAFQLKVEMVAKGISPDVATY 486
Query: 187 NVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ +I+G+ L L +EM G P+ VTY +LI + C E L++A L M +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 364 KGVEPNLISYNAVINGLCGQGK 429
KG P++++YN +ING Q +
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSR 568
Score = 61.6 bits (148), Expect = 6e-08
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = +1
Query: 49 GFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTYNVMIRGV-VFNNLE 225
G SP V +Y+S++ + + V +F +M+ G+ P+ TY +I + +L+
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCD--LFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535
Query: 226 SGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYNAVI 405
RL EM +KG P+ VTYN LI K+ R +EA LL + + PN I+YN +I
Sbjct: 536 KALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Query: 406 N 408
+
Sbjct: 596 D 596
Score = 56.6 bits (135), Expect = 2e-06
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+DKAL + + + GFSP +++YN +++ + A+R+ ++ PN TY
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK--EAKRLLLKLLYEESVPNEITY 591
Query: 187 NVMIRGVVFNNLE--------SGF----------RLMREMERKGCLPNAVTYNTLIASCC 312
N +I NNLE GF R++ M +KG N YN +I
Sbjct: 592 NTLIDNC--NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHS 649
Query: 313 KEKRLEEAFGLLRTMAKKGVEPNLISYNAVINGLCGQGK 429
K +E+A+ L + M G P+ ++ A+ L +GK
Sbjct: 650 KVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
>ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product
[Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 747
Score = 166 bits (419), Expect = 2e-39
Identities = 81/143 (56%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 LIDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYT 183
LIDKAL+I++LA HGF PGVLSYN++LD+ R ++ AE VF +M+ + VSPNV+T
Sbjct: 149 LIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR-SKRNISFAENVFKEMLESQVSPNVFT 207
Query: 184 YNVMIRGVVF-NNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMA 360
YN++IRG F N++ L +ME KGCLPN VTYNTLI CK +++++ F LLR+MA
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 361 KKGVEPNLISYNAVINGLCGQGK 429
KG+EPNLISYN VINGLC +G+
Sbjct: 268 LKGLEPNLISYNVVINGLCREGR 290
Score = 87.4 bits (215), Expect = 1e-15
Identities = 43/140 (30%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+++A+ ++ G P +Y +++D + G + A RV +M NG SP+V TY
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN--EAYRVLREMNDNGFSPSVVTY 418
Query: 187 NVMIRG-VVFNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
N +I G V +E ++ +M+ KG P+ V+Y+T+++ C+ ++EA + R M +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 364 KGVEPNLISYNAVINGLCGQ 423
KG++P+ I+Y+++I G C Q
Sbjct: 479 KGIKPDTITYSSLIQGFCEQ 498
Score = 86.7 bits (213), Expect = 2e-15
Identities = 45/141 (31%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+++A ++ N +GFSP V++YN++++ G + A V DM G+SP+V +Y
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK--MEDAIAVLEDMKEKGLSPDVVSY 453
Query: 187 NVMIRGVVFN-NLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ ++ G + +++ R+ REM KG P+ +TY++LI C+++R +EA L M +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 364 KGVEPNLISYNAVINGLCGQG 426
G+ P+ +Y A+IN C +G
Sbjct: 514 VGLPPDEFTYTALINAYCMEG 534
Score = 84.7 bits (208), Expect = 7e-15
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Frame = +1
Query: 43 RHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIR-NGVSPNVYTYNVMIRGVVFNN 219
RHG +P V++Y S++ S+ + G+ ++ F D +R G+ PN TY ++ G
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGN---MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 220 -LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPNLISYN 396
+ +R++REM G P+ VTYN LI C ++E+A +L M +KG+ P+++SY+
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 397 AVINGLC 417
V++G C
Sbjct: 455 TVLSGFC 461
Score = 80.9 bits (198), Expect = 1e-13
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
++ A+ ++ G SP V+SY+++L R S+ V A RV +M+ G+ P+ TY
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR--SYDVDEALRVKREMVEKGIKPDTITY 488
Query: 187 NVMIRGVVFNN-LESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+ +I+G + L EM R G P+ TY LI + C E LE+A L M +
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 364 KGVEPNLISYNAVINGLCGQGK 429
KGV P++++Y+ +INGL Q +
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSR 570
Score = 79.3 bits (194), Expect = 3e-13
Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Frame = +1
Query: 25 IINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTYNVMIRG 204
++ NR G+S ++YN+++ + G+ A + +M+R+G++P+V TY +I
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH--QALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 205 VV-FNNLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAKKGVEPN 381
+ N+ + +M +G PN TY TL+ ++ + EA+ +LR M G P+
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 382 LISYNAVINGLCGQGK 429
+++YNA+ING C GK
Sbjct: 415 VVTYNALINGHCVTGK 430
Score = 62.0 bits (149), Expect = 5e-08
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +1
Query: 7 IDKALNIINLANRHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTY 186
+D+AL + G P ++Y+S++ A ++ +M+R G+ P+ +TY
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ--RRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 187 NVMIRGVVFN-NLESGFRLMREMERKGCLPNAVTYNTLIASCCKEKRLEEAFGLLRTMAK 363
+I +LE +L EM KG LP+ VTY+ LI K+ R EA LL +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 364 KGVEPNLISYNAVI 405
+ P+ ++Y+ +I
Sbjct: 584 EESVPSDVTYHTLI 597
Score = 56.6 bits (135), Expect = 2e-06
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Frame = +1
Query: 43 RHGFSPGVLSYNSILDSIFRHGSHSVVSAERVFGDMIRNGVSPNVYTYNVMIRGV-VFNN 219
R G P +Y +++++ G + A ++ +M+ GV P+V TY+V+I G+ +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGD--LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 220 LESGFRLMREMERKGCLPNAVTYNTLIASC---------------CKEKRLEEAFGLLRT 354
RL+ ++ + +P+ VTY+TLI +C C + + EA + +
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 355 MAKKGVEPNLISYNAVINGLCGQG 426
M K +P+ +YN +I+G C G
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAG 654