BLASTX nr result
ID: Glycyrrhiza23_contig00032524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00032524
(270 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi... 151 6e-35
emb|CBI35582.3| unnamed protein product [Vitis vinifera] 139 2e-31
emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera] 138 4e-31
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi... 134 6e-30
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi... 134 6e-30
>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 151 bits (381), Expect = 6e-35
Identities = 74/90 (82%), Positives = 82/90 (91%)
Frame = +1
Query: 1 NISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQ 180
NISV+D+VSYNILIIGYS+T+D ESL LFSEMRL GM PDIVSFMGV+SACANLA I+Q
Sbjct: 502 NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQ 561
Query: 181 GKEIHGQLVRKLFHTHVFAANSLLDLYTKC 270
GKEIHG LVRKLFHTH+F ANSLLDLYT+C
Sbjct: 562 GKEIHGLLVRKLFHTHLFVANSLLDLYTRC 591
Score = 65.9 bits (159), Expect = 3e-09
Identities = 31/89 (34%), Positives = 55/89 (61%)
Frame = +1
Query: 4 ISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQG 183
+ V++ VS+N +I +++ E++ L +M+ G TP+ V+F V+ ACA L + G
Sbjct: 403 MGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVG 462
Query: 184 KEIHGQLVRKLFHTHVFAANSLLDLYTKC 270
KEIH +++R +F +N+L D+Y+KC
Sbjct: 463 KEIHARIIRVGSSLDLFVSNALTDMYSKC 491
>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 139 bits (351), Expect = 2e-31
Identities = 66/88 (75%), Positives = 78/88 (88%)
Frame = +1
Query: 7 SVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQGK 186
S++D+VSYNILI+G+SQTSDCSESL+LFSEM+L G+ D VSFMG +SACANL +IKQGK
Sbjct: 305 SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGK 364
Query: 187 EIHGQLVRKLFHTHVFAANSLLDLYTKC 270
EIHG L+RKLFH H+F ANSLLD YTKC
Sbjct: 365 EIHGFLLRKLFHIHLFVANSLLDFYTKC 392
Score = 58.5 bits (140), Expect = 5e-07
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +1
Query: 28 YNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQGKEIHGQLV 207
+N LI GYS + L ++++M G+ PD +F V+ ACA+ +++G+E+HG +V
Sbjct: 10 WNTLIRGYS-IAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 208 RKLFHTHVFAANSLLDLYTKC 270
+ F + VF N+LL Y C
Sbjct: 69 KLGFESDVFVGNTLLSFYGNC 89
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = +1
Query: 4 ISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQG 183
+ K+ VS+N +I ++Q ++ L +M+ G P+ V+F V+ ACA + ++ G
Sbjct: 204 LDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPG 263
Query: 184 KEIHGQLVRKLFHTHVFAANSLLDLYTK 267
KEIH + + +F +N+L D+Y K
Sbjct: 264 KEIHARSIHMGCAFDLFVSNALTDMYAK 291
>emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 138 bits (348), Expect = 4e-31
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +1
Query: 7 SVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQGK 186
S++D+VSYNILI+G SQTSDCSESL+LFSEM+L G+ D VSFMG +SACANL +IKQGK
Sbjct: 406 SLRDEVSYNILIVGXSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGK 465
Query: 187 EIHGQLVRKLFHTHVFAANSLLDLYTKC 270
EIHG L+RKLFH H+F ANSLLD YTKC
Sbjct: 466 EIHGFLLRKLFHIHLFVANSLLDFYTKC 493
Score = 64.3 bits (155), Expect = 1e-08
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 KDKVSYNILIIGYSQTSDCSESLNLFSEMRL-SGMTPDIVSFMGVISACANLASIKQGKE 189
KD VS+N +I +S E L+LF EMRL SG+ P++VS + V+ CA + E
Sbjct: 105 KDLVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASE 164
Query: 190 IHGQLVRKLFHTHVFAANSLLDLYTKC 270
IHG +V+ V N+LLD+Y KC
Sbjct: 165 IHGYVVKVGLEFQVIVGNALLDVYGKC 191
Score = 58.2 bits (139), Expect = 7e-07
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +1
Query: 28 YNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQGKEIHGQLV 207
+N LI GYS + L ++++M G+ PD +F V+ ACA+ +++G+E+HG +V
Sbjct: 10 WNTLIRGYS-IAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGXVV 68
Query: 208 RKLFHTHVFAANSLLDLYTKC 270
+ F + VF N+LL Y C
Sbjct: 69 KLGFESDVFVGNTLLSFYGNC 89
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/85 (29%), Positives = 45/85 (52%)
Frame = +1
Query: 13 KDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQGKEI 192
K+ VS+N +I + ++L++F M G+ P+ ++ + L K G+E+
Sbjct: 207 KNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREV 266
Query: 193 HGQLVRKLFHTHVFAANSLLDLYTK 267
HG +R + +F ANSL+D+Y K
Sbjct: 267 HGSSIRMGLESDIFIANSLIDMYAK 291
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = +1
Query: 4 ISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQG 183
+ K+ VS+N +I ++Q ++ L +M+ G P+ V+F V+ ACA + ++ G
Sbjct: 305 LDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPG 364
Query: 184 KEIHGQLVRKLFHTHVFAANSLLDLYTK 267
KEIH + + +F +N+L D+Y K
Sbjct: 365 KEIHARSIHMGCAFDLFVSNALTDMYAK 392
>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 134 bits (338), Expect = 6e-30
Identities = 63/90 (70%), Positives = 76/90 (84%)
Frame = +1
Query: 1 NISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQ 180
N S KD+VSYNILIIGYS+T DC +SLNLFSEMRL G PD+VSF+GVISACANLA++KQ
Sbjct: 373 NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 432
Query: 181 GKEIHGQLVRKLFHTHVFAANSLLDLYTKC 270
GKE+HG +R ++H+F +NSLLD YTKC
Sbjct: 433 GKEVHGVALRNHLYSHLFVSNSLLDFYTKC 462
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/90 (35%), Positives = 52/90 (57%)
Frame = +1
Query: 1 NISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQ 180
N+ ++ VS+N +I Y+ E++ +M+ +G P+ V+F V+ ACA L +
Sbjct: 273 NLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGP 332
Query: 181 GKEIHGQLVRKLFHTHVFAANSLLDLYTKC 270
GKEIH VR + +F +NSL+D+Y KC
Sbjct: 333 GKEIHAMGVRIGLTSDLFVSNSLIDMYAKC 362
Score = 61.2 bits (147), Expect = 8e-08
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +1
Query: 13 KDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQGKEI 192
K++VS+N +I G + C ++LN F M +G P+ V+ ++ L K GKEI
Sbjct: 176 KNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEI 235
Query: 193 HGQLVRKLFHTHVFAANSLLDLYTK 267
HG +R T +F ANSL+D+Y K
Sbjct: 236 HGFSMRMGTETDIFIANSLIDMYAK 260
>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 134 bits (338), Expect = 6e-30
Identities = 63/90 (70%), Positives = 76/90 (84%)
Frame = +1
Query: 1 NISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQ 180
N S KD+VSYNILIIGYS+T DC +SLNLFSEMRL G PD+VSF+GVISACANLA++KQ
Sbjct: 522 NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 581
Query: 181 GKEIHGQLVRKLFHTHVFAANSLLDLYTKC 270
GKE+HG +R ++H+F +NSLLD YTKC
Sbjct: 582 GKEVHGVALRNHLYSHLFVSNSLLDFYTKC 611
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/90 (35%), Positives = 52/90 (57%)
Frame = +1
Query: 1 NISVKDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQ 180
N+ ++ VS+N +I Y+ E++ +M+ +G P+ V+F V+ ACA L +
Sbjct: 422 NLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGP 481
Query: 181 GKEIHGQLVRKLFHTHVFAANSLLDLYTKC 270
GKEIH VR + +F +NSL+D+Y KC
Sbjct: 482 GKEIHAMGVRIGLTSDLFVSNSLIDMYAKC 511
Score = 61.2 bits (147), Expect = 8e-08
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +1
Query: 13 KDKVSYNILIIGYSQTSDCSESLNLFSEMRLSGMTPDIVSFMGVISACANLASIKQGKEI 192
K++VS+N +I G + C ++LN F M +G P+ V+ ++ L K GKEI
Sbjct: 325 KNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEI 384
Query: 193 HGQLVRKLFHTHVFAANSLLDLYTK 267
HG +R T +F ANSL+D+Y K
Sbjct: 385 HGFSMRMGTETDIFIANSLIDMYAK 409