BLASTX nr result
ID: Glycyrrhiza23_contig00032523
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00032523 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containi... 98 8e-19 ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containi... 97 1e-18 ref|XP_003589662.1| Pentatricopeptide repeat-containing protein ... 80 2e-13 ref|XP_002526312.1| pentatricopeptide repeat-containing protein,... 74 1e-11 ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 73 3e-11 >ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Glycine max] Length = 675 Score = 97.8 bits (242), Expect = 8e-19 Identities = 44/53 (83%), Positives = 48/53 (90%) Frame = +2 Query: 2 LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE 160 LG W+EALRLYKDMLDREI+PDSCTHSALLKHL+KDYK H V+HLENVI GE Sbjct: 623 LGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHLENVIAAGE 675 >ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Glycine max] Length = 687 Score = 97.1 bits (240), Expect = 1e-18 Identities = 43/53 (81%), Positives = 48/53 (90%) Frame = +2 Query: 2 LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE 160 LG W+EALRLYKDMLDREI+PDSCTH +LLKHL+KDYKLH V+HLENVI GE Sbjct: 635 LGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIAAGE 687 >ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 988 Score = 80.1 bits (196), Expect = 2e-13 Identities = 36/45 (80%), Positives = 42/45 (93%) Frame = +2 Query: 11 WKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENV 145 W++AL+LYKDMLDREI+PDSCTHSAL+KHLSKDYKL AV LEN+ Sbjct: 643 WQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENL 687 >ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 729 Score = 74.3 bits (181), Expect = 1e-11 Identities = 34/57 (59%), Positives = 43/57 (75%) Frame = +2 Query: 2 LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE*TYD 172 +G+W+EALRLY ML + I PDSCTH ALLK L KDYK+ AVQ +E++I G+ T D Sbjct: 670 MGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTID 726 >ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Cucumis sativus] Length = 717 Score = 72.8 bits (177), Expect = 3e-11 Identities = 32/61 (52%), Positives = 49/61 (80%) Frame = +2 Query: 2 LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE*TYDIKM 181 +G W+EALRLY++MLDR+I+PDS THS LK+L +DY++HAVQ +E++I E ++++ Sbjct: 648 MGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINVRI 707 Query: 182 E 184 E Sbjct: 708 E 708