BLASTX nr result

ID: Glycyrrhiza23_contig00032523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032523
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_003589662.1| Pentatricopeptide repeat-containing protein ...    80   2e-13
ref|XP_002526312.1| pentatricopeptide repeat-containing protein,...    74   1e-11
ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    73   3e-11

>ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/53 (83%), Positives = 48/53 (90%)
 Frame = +2

Query: 2   LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE 160
           LG W+EALRLYKDMLDREI+PDSCTHSALLKHL+KDYK H V+HLENVI  GE
Sbjct: 623 LGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHLENVIAAGE 675


>ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/53 (81%), Positives = 48/53 (90%)
 Frame = +2

Query: 2   LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE 160
           LG W+EALRLYKDMLDREI+PDSCTH +LLKHL+KDYKLH V+HLENVI  GE
Sbjct: 635 LGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIAAGE 687


>ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478710|gb|AES59913.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 988

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +2

Query: 11  WKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENV 145
           W++AL+LYKDMLDREI+PDSCTHSAL+KHLSKDYKL AV  LEN+
Sbjct: 643 WQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENL 687


>ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534393|gb|EEF36101.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 729

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = +2

Query: 2   LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE*TYD 172
           +G+W+EALRLY  ML + I PDSCTH ALLK L KDYK+ AVQ +E++I  G+ T D
Sbjct: 670 MGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTID 726


>ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/61 (52%), Positives = 49/61 (80%)
 Frame = +2

Query: 2   LGRWKEALRLYKDMLDREIEPDSCTHSALLKHLSKDYKLHAVQHLENVIGGGE*TYDIKM 181
           +G W+EALRLY++MLDR+I+PDS THS  LK+L +DY++HAVQ +E++I   E   ++++
Sbjct: 648 MGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINVRI 707

Query: 182 E 184
           E
Sbjct: 708 E 708


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