BLASTX nr result

ID: Glycyrrhiza23_contig00032518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032518
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48656.1| unknown [Lotus japonicus]                               85   7e-15
ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...    76   2e-12
emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]    71   8e-11
ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]    68   7e-10

>gb|AFK48656.1| unknown [Lotus japonicus]
          Length = 219

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
 Frame = -2

Query: 273 STPLPVNPL-----SVNFSYAITVKLNEDNFLVWKQQVEPVLKAHRLHHYLNNSKIPPQF 109
           +TP+P+        S +  + + +KL++ NFL WKQ VE +++ HRL  +L + +IPP++
Sbjct: 16  ATPVPLAVAQPQLSSTSLVHKLILKLDDSNFLSWKQHVEGIVRTHRLQSFLAHPEIPPRW 75

Query: 108 LSMSNRVVGIENPAYNAWELQDHLLLSWIQSSLS 7
           LS  +RV  +ENPAY  WE QD  L +W+ SSLS
Sbjct: 76  LSEDDRVNAVENPAYQIWEQQDSALFTWLLSSLS 109


>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula]
           gi|355493153|gb|AES74356.1| Histone deacetylase
           [Medicago truncatula]
          Length = 1775

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 19/132 (14%)
 Frame = -2

Query: 345 PPAHLHQSLPHSILQS------VPPPLH-------CFSTPLPVNPLSVN------FSYAI 223
           P + +   +   ILQS      V PPL+         S+P P +   V       F   +
Sbjct: 415 PDSGMDVDVERDILQSKVKREIVEPPLNDLVAMSTATSSPTPFDAQRVTAAASKTFKQVV 474

Query: 222 TVKLNEDNFLVWKQQVEPVLKAHRLHHYLNNSKIPPQFLSMSNRVVGIENPAYNAWELQD 43
           ++KL++ N+L WKQQVE VL+  ++  ++ + +IPP +L+ + R  G EN AY  WE QD
Sbjct: 475 SIKLDDTNYLQWKQQVEGVLRGTKMVKFVISPEIPPVYLTDAAREAGTENSAYTEWEEQD 534

Query: 42  HLLLSWIQSSLS 7
            LL +W+ S++S
Sbjct: 535 SLLCTWVLSTIS 546


>emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]
          Length = 685

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -2

Query: 249 LSVNFSYAITVKLNEDNFLVWKQQVEPVLKAHRLHHY-LNNSKIPPQFLSMSNRVVGIEN 73
           L V+F++   VKL+ +NFL+WKQQV   +K + L  + L    IPP+FL       G  N
Sbjct: 10  LPVSFTHYFLVKLDNNNFLIWKQQVVFAIKGYGLQRFVLFEYAIPPRFLLKEYAQAGNVN 69

Query: 72  PAYNAWELQDHLLLSWIQSSLSE 4
            A+  WE QD LLLSW+ SS+SE
Sbjct: 70  KAFVEWEQQDQLLLSWLLSSISE 92


>ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|222839735|gb|EEE78058.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
 Frame = -2

Query: 273 STPLPVNPLSVNFSYAITVKLNEDNFLVWKQQVEPVLKAHRLHHYLNNS-KIPPQFLSMS 97
           ST  P  P   N  + +T+KL+  N+ VWK QV P    H L+ YL+ +  IPP+ L++S
Sbjct: 9   STTPPTIPTLSNLPFTMTIKLHSSNYPVWKAQVVPYFCGHDLYGYLDGTISIPPKELNIS 68

Query: 96  NRVVG----IENPAYNAWELQDHLLLSWIQSSLSE 4
           +   G    I NP Y+ W  QD L+L+ I SSL+E
Sbjct: 69  DSTSGTSQTIPNPLYHQWLRQDSLILATINSSLTE 103


>emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]
          Length = 410

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/81 (37%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -2

Query: 243 VNFSYAITVKLNEDNFLVWKQQVEPVLKAHRLHHYLNNSK-IPPQFLSMSNRVVGIENPA 67
           V+FS+ ++++L+ +NFL+W++QV   ++ H+L +++  +K  P  FL++ +  +   NP 
Sbjct: 14  VSFSHXVSIRLDNNNFLLWRKQVLTAIRGHKLQNFVFGTKPXPLXFLTLRDEEMDNVNPX 73

Query: 66  YNAWELQDHLLLSWIQSSLSE 4
           +  WE QD LLLSW+ S +SE
Sbjct: 74  FLDWEQQDQLLLSWLLSXMSE 94


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