BLASTX nr result

ID: Glycyrrhiza23_contig00032513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032513
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519548.1| PREDICTED: uncharacterized protein LOC100779...    62   4e-08
ref|XP_002306744.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003617415.1| hypothetical protein MTR_5g091310 [Medicago ...    60   2e-07
ref|XP_002302139.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002892344.1| hypothetical protein ARALYDRAFT_470668 [Arab...    55   5e-06

>ref|XP_003519548.1| PREDICTED: uncharacterized protein LOC100779505 [Glycine max]
          Length = 68

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +3

Query: 126 WKRLHLHTNIVDTVVFKIQYVVEGVVLVTSLAFFYLCCG 242
           WKRL L T I+DTVVFK+ Y  E VVLV++L FFYLCCG
Sbjct: 27  WKRLDLQTTIMDTVVFKVLYAAEAVVLVSTLCFFYLCCG 65


>ref|XP_002306744.1| predicted protein [Populus trichocarpa] gi|222856193|gb|EEE93740.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/72 (47%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +3

Query: 30  WSFKKKVMMSKEHFMWWPXXXXXXXXXXXXXXWKR-LHLHTNIVDTVVFKIQYVVEGVVL 206
           WS KK VMM K+    W               WKR L    NI+D +VFK+ YV E VVL
Sbjct: 6   WSLKK-VMMKKDQLWPWKISGIK---------WKRGLDFQLNIIDNLVFKVLYVAEAVVL 55

Query: 207 VTSLAFFYLCCG 242
           V++L FFYLCCG
Sbjct: 56  VSTLCFFYLCCG 67


>ref|XP_003617415.1| hypothetical protein MTR_5g091310 [Medicago truncatula]
           gi|355518750|gb|AET00374.1| hypothetical protein
           MTR_5g091310 [Medicago truncatula]
          Length = 86

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = +3

Query: 6   EKSTRSSRWSFKKKVMMSKEHFMWW--PXXXXXXXXXXXXXXWKRL-HLHTNIVDTVVFK 176
           E  T+  R S  +K +M K+  M W                 WKRL HL T  +DTVVF+
Sbjct: 2   EDQTKDIRKSSLRKRLMGKKSSMLWLKKVKKEIWPWRFSAFRWKRLDHLQTTFMDTVVFR 61

Query: 177 IQYVVEGVVLVTSLAFFYLCCG 242
           I  V E VVLV+++ FFYLCCG
Sbjct: 62  ILSVAEAVVLVSTVCFFYLCCG 83


>ref|XP_002302139.1| predicted protein [Populus trichocarpa] gi|222843865|gb|EEE81412.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +3

Query: 42  KKVMMSKEHFMWWPXXXXXXXXXXXXXXWKR-LHLHTNIVDTVVFKIQYVVEGVVLVTSL 218
           KKVM  K+    W               WKR L  H NI+D +VFK+ YV E  VLV++L
Sbjct: 9   KKVMTGKDRLYPWKFSGIK---------WKRGLDFHLNIIDNLVFKVLYVAEAAVLVSTL 59

Query: 219 AFFYLCCG 242
            FFYLCCG
Sbjct: 60  CFFYLCCG 67


>ref|XP_002892344.1| hypothetical protein ARALYDRAFT_470668 [Arabidopsis lyrata subsp.
           lyrata] gi|297338186|gb|EFH68603.1| hypothetical protein
           ARALYDRAFT_470668 [Arabidopsis lyrata subsp. lyrata]
          Length = 86

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
 Frame = +3

Query: 27  RW-SFKKKVMMSKE---HFMWWPXXXXXXXXXXXXXXWKRLHLH--TNIVDTVVFKIQYV 188
           +W S KKK    +E       W               WKR+ +   T IVD VV+K+ YV
Sbjct: 6   KWASLKKKKQQQEETAKETQTWQRLRNLFSTSSSSAKWKRVEIIMVTEIVDGVVYKVMYV 65

Query: 189 VEGVVLVTSLAFFYLCCG 242
           VE +VLV++L FFYLCCG
Sbjct: 66  VEALVLVSTLCFFYLCCG 83


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