BLASTX nr result

ID: Glycyrrhiza23_contig00032506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032506
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05702.1| reverse transcriptase - beet retrotransposon, put...    68   7e-10
ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago ...    67   1e-09
ref|XP_003589852.1| hypothetical protein MTR_1g040450 [Medicago ...    67   2e-09
ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786...    62   6e-08
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    59   4e-07

>gb|ABN05702.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 384

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/83 (37%), Positives = 45/83 (54%)
 Frame = +3

Query: 3   GEGFLGICVEWGHSNSCCFLVNVYSPCDLLGKRRLWTELAMSKRGFCGCLWVVAGDFNAV 182
           GEGF+G+ +EWG     C ++NVYS CDL  K+RLW  L +++       W +  DFN  
Sbjct: 49  GEGFVGVFLEWGAKKIKCIIINVYSKCDLQSKKRLWERLVLARTNLERWAWCILRDFN-- 106

Query: 183 LAVSERQGRGGITSVGEREEFLQ 251
             V ER+ R GI       + ++
Sbjct: 107 -VVGEREERRGINDEATGSQIIE 128


>ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago truncatula]
           gi|355500907|gb|AES82110.1| hypothetical protein
           MTR_7g108440 [Medicago truncatula]
          Length = 848

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3   GEGFLGICVEWGHSNSCCFLVNVYSPCDLLGKRRLWTELAMSKRGFCGCLWVVAGDFNAV 182
           G+G++G+C EWG     C ++NVY  CD + KRRLW  +   +       W V GDFN V
Sbjct: 652 GDGYVGVCFEWGVLRHKCIVINVYVKCDSMSKRRLWEAILEERCQRGNGAWCVLGDFNVV 711

Query: 183 LAVSERQG---RGGITSVGEREEFLQFVEEMHLVDV 281
               ER G       + V +   F +FV +M + D+
Sbjct: 712 ANSDERCGIHVESSSSQVVDMNWFNRFVTDMEVEDL 747


>ref|XP_003589852.1| hypothetical protein MTR_1g040450 [Medicago truncatula]
           gi|355478900|gb|AES60103.1| hypothetical protein
           MTR_1g040450 [Medicago truncatula]
          Length = 446

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/91 (35%), Positives = 51/91 (56%)
 Frame = +3

Query: 9   GFLGICVEWGHSNSCCFLVNVYSPCDLLGKRRLWTELAMSKRGFCGCLWVVAGDFNAVLA 188
           G+ G  +  G     C   NVY+PCDL+ K+ LW  L +    +      V GDFN+V +
Sbjct: 161 GYCGKVISSGEEFVVC---NVYAPCDLVAKKELWERLHLLAINYIDLCLCVCGDFNSVQS 217

Query: 189 VSERQGRGGITSVGEREEFLQFVEEMHLVDV 281
           + ER+GRG +   G+ E F +F+++  L+D+
Sbjct: 218 IDERKGRGTVFRQGDAELFNKFIQDNFLIDL 248


>ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786254 [Glycine max]
          Length = 3007

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = +3

Query: 3    GEGFLGICVEWGHSNSCCFLVNVYSPCDLLGKRRLWTELAMSKRGFCGCLWVVAGDFNAV 182
            G GF+ +  +W   +    ++N+YSPC L  KR LW  +   K    G  W V GDFN +
Sbjct: 1632 GAGFIMVTGKWCQESQPRHIINIYSPCSLQDKRLLWERIKQLKTQNPGGYWCVLGDFNNI 1691

Query: 183  LAVSER--QGRGGITSVGEREEFLQFVEEMHLVDV 281
               +ER    +GG T  G   +F ++++EM + +V
Sbjct: 1692 RVAAERVSTSQGGTTD-GSIRDFNEWIDEMEVEEV 1725


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3    GEGFLGICVEWGHSNSCCFLVNVYSPCDLLGKRRLWTELAMSKRGFCGCLWVVAGDFNAV 182
            G  F+ +  +W   +    +VN+Y+PCDL GKR LW EL   K      LW   GDFN+V
Sbjct: 730  GGSFIMLEGKWVEEDQWIQIVNIYAPCDLAGKRTLWNELRHLKAANPTGLWCFLGDFNSV 789

Query: 183  LAVSERQGRGGITSV-GEREEFLQFVEEMHLVDV 281
             +  ER      + V  +  EF  ++ E+ L D+
Sbjct: 790  RSQEERISLSQRSVVSADSSEFNDWISELDLHDI 823



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3    GEGFLGICVEWGHSNSCCFLVNVYSPCDLLGKRRLWTELAMSKRGFCGCLWVVAGDFNAV 182
            G  F+    +W   N    +VNVY+PCDL GKR LW +L   K      LW   GDFN  
Sbjct: 2347 GRSFIMQEGKWVKENQWIRIVNVYAPCDLAGKRILWDDLRQLKASNPTGLWCFLGDFNTT 2406

Query: 183  LAVSER---QGRGGITSVGEREEFLQFVEEMHLVDV 281
             +  ER     R  +TS     +F  ++ EM L D+
Sbjct: 2407 RSQEERISLSQRSVVTSY--TADFNDWISEMELHDI 2440


Top