BLASTX nr result

ID: Glycyrrhiza23_contig00032503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032503
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncat...    85   5e-15
ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncat...    76   2e-12
ref|XP_003602616.1| F-box/kelch-repeat protein [Medicago truncat...    71   1e-10
ref|XP_003592682.1| F-box/kelch-repeat protein [Medicago truncat...    71   1e-10
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    70   2e-10

>ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483135|gb|AES64338.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
 Frame = -2

Query: 213 KLFTIPYTVDLGFL--RKVLYISEDEQVLLESRSRLVVYDSKTSTFKTPNVRNINGWVAP 40
           KLF +PY  D+G     K LY++ED+QVLL+ ++ LVVY+S+  TFKTP +++IN W+ P
Sbjct: 304 KLFRVPYMGDVGSCPYTKALYLTEDDQVLLKYQAELVVYNSRDGTFKTPEIQHINRWLVP 363

Query: 39  EVYVESLVSPCS 4
           +VY ESL+SPCS
Sbjct: 364 QVYQESLISPCS 375


>ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355501748|gb|AES82951.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 8/78 (10%)
 Frame = -2

Query: 213 KLFTIPYTVDLGF--LRKVLYISEDEQVLLE------SRSRLVVYDSKTSTFKTPNVRNI 58
           KL+ +PY  D G     KVLY+SED+++L+E      S+ +LVVYDSK  T K P ++NI
Sbjct: 308 KLYNVPYMEDRGLSSYTKVLYVSEDDKMLMEFYELGSSKLKLVVYDSKNGTLKIPVIQNI 367

Query: 57  NGWVAPEVYVESLVSPCS 4
           N  + P+VY+ESL+SPCS
Sbjct: 368 NRRMDPKVYIESLISPCS 385


>ref|XP_003602616.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355491664|gb|AES72867.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 345

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
 Frame = -2

Query: 213 KLFTI---------PYTVDLGFLRKVLYISEDEQVLLE------SRSRLVVYDSKTSTFK 79
           KL+TI         PYT       KV+YISED+Q L++      S+ +L VYDSK  T K
Sbjct: 268 KLYTIRAMGNHDFDPYT-------KVVYISEDDQFLIDLYERTSSKMKLGVYDSKIGTLK 320

Query: 78  TPNVRNINGWVAPEVYVESLVSPCS 4
              ++NINGW+ PE+Y ESL+SPCS
Sbjct: 321 FHMIQNINGWMGPEIYAESLISPCS 345


>ref|XP_003592682.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355481730|gb|AES62933.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 465

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
 Frame = -2

Query: 213 KLFTIPYTVDLGFLR--KVLYISEDEQVLLE----SRSRLVVYDSKTSTFKTPNVRNING 52
           KLF+IPY    GFL   + +YISED+QVL++     +  L+VYDSK  T K P ++N+NG
Sbjct: 391 KLFSIPYMEGRGFLGYCQSVYISEDDQVLMQFLKMGKFSLLVYDSKNDTLKIPEIQNVNG 450

Query: 51  WVAPEVYVESLVSP 10
            + P  Y+ESL+SP
Sbjct: 451 RMTPNTYIESLISP 464


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
 Frame = -2

Query: 213 KLFTIPYT--VDLGFLRKVLYISEDEQVLLESRSRLVVYDSKTSTFKTPNVRNINGWVAP 40
           KLF +PY    D     K L ISED+QVL+E  S L VY+S+  T K P++++I  ++ P
Sbjct: 322 KLFRVPYMGISDSYLYTKALCISEDDQVLMEFNSELAVYNSRNGTSKIPDIQDIYMYMTP 381

Query: 39  EVYVESLVSPC 7
           EVY+ESL+SPC
Sbjct: 382 EVYIESLISPC 392


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