BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032488
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   170   1e-40
ref|XP_003524036.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   168   5e-40
ref|XP_003549531.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   159   2e-37
ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   129   3e-28

>ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 973

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/121 (67%), Positives = 92/121 (76%)
 Frame = +2

Query: 5   EAATEDHFNNDKEKQRNYVNGLIKSKRXXXXXXXXXXXXSSPWSRATQAKLGTRLVELLL 184
           E   ED  ++DKEKQRNY+N L+K  R             SPWSR TQAKLG+RLVELL+
Sbjct: 276 EGDAEDSLDSDKEKQRNYLNSLLKKNRLREVQMILRKEECSPWSRDTQAKLGSRLVELLI 335

Query: 185 ETAYVHSPVNQSVDTPPDIRPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAK 364
           +TAYVHSPVNQS DTPPDIRPAFRHGFK +  +PGQK SKK GIIQCDPLVL G+EKCAK
Sbjct: 336 DTAYVHSPVNQSADTPPDIRPAFRHGFKAVPWHPGQKFSKKYGIIQCDPLVLVGLEKCAK 395

Query: 365 H 367
           H
Sbjct: 396 H 396


>ref|XP_003524036.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 1043

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/121 (65%), Positives = 92/121 (76%)
 Frame = +2

Query: 5   EAATEDHFNNDKEKQRNYVNGLIKSKRXXXXXXXXXXXXSSPWSRATQAKLGTRLVELLL 184
           E   ED  ++DKEKQRNY+N L+K  R             SPWS+ TQAKLG+RL+ELL+
Sbjct: 346 EGDAEDSLDSDKEKQRNYLNSLLKKNRLREVQMILRKEECSPWSQDTQAKLGSRLIELLI 405

Query: 185 ETAYVHSPVNQSVDTPPDIRPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAK 364
           +TAYVHSPVNQS DTPPDIRPAFRHGFK +  +PGQK SKK G+IQCDPLVL G+EKCAK
Sbjct: 406 DTAYVHSPVNQSADTPPDIRPAFRHGFKAVPWHPGQKFSKKYGVIQCDPLVLVGLEKCAK 465

Query: 365 H 367
           H
Sbjct: 466 H 466


>ref|XP_003549531.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 951

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/121 (62%), Positives = 90/121 (74%)
 Frame = +2

Query: 5   EAATEDHFNNDKEKQRNYVNGLIKSKRXXXXXXXXXXXXSSPWSRATQAKLGTRLVELLL 184
           EA  ED  +NDK+K R +VNGLIK +R            S PW R TQAKLG+RL+ELL+
Sbjct: 253 EAGDEDSMDNDKQKLRKHVNGLIKRRRLKQVQMLLKEKESGPWGRDTQAKLGSRLIELLI 312

Query: 185 ETAYVHSPVNQSVDTPPDIRPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAK 364
           ETA+VHSPVNQS DTPPDIRPAFRH FK +S+NP QKI K  G+I+CDPLVLAG++K  K
Sbjct: 313 ETAFVHSPVNQSADTPPDIRPAFRHKFKAISKNPEQKILKNYGVIECDPLVLAGMDKSVK 372

Query: 365 H 367
           H
Sbjct: 373 H 373


>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/117 (56%), Positives = 82/117 (70%)
 Frame = +2

Query: 17  EDHFNNDKEKQRNYVNGLIKSKRXXXXXXXXXXXXSSPWSRATQAKLGTRLVELLLETAY 196
           ++  + +KE  R  VN LI+ KR            + PWSR TQAKLG+RL+ELL ETAY
Sbjct: 189 QETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLIELLTETAY 248

Query: 197 VHSPVNQSVDTPPDIRPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAKH 367
           V  PVNQS D PPD+RPAFRH FK L++NPGQKI KK G+I+CDPL+L G++  AKH
Sbjct: 249 VQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKH 305


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/122 (48%), Positives = 82/122 (67%)
 Frame = +2

Query: 2   KEAATEDHFNNDKEKQRNYVNGLIKSKRXXXXXXXXXXXXSSPWSRATQAKLGTRLVELL 181
           K  A  +    +KE  R  VNGLI+ ++               W R TQAKLG+RL+ELL
Sbjct: 278 KVRADTECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELL 337

Query: 182 LETAYVHSPVNQSVDTPPDIRPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCA 361
           +E+A++  PV+QS D+PPDIRPAF HGFKP+++ PGQ   KK G+++CDP+VLAG+++ A
Sbjct: 338 IESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTA 397

Query: 362 KH 367
           KH
Sbjct: 398 KH 399