BLASTX nr result

ID: Glycyrrhiza23_contig00032475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032475
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313440.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002298363.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|NP_190235.1| U-box domain-containing protein 13 [Arabidopsis...    72   6e-11
ref|XP_002877490.1| armadillo/beta-catenin repeat family protein...    72   6e-11
ref|XP_002283992.1| PREDICTED: U-box domain-containing protein 1...    72   6e-11

>ref|XP_002313440.1| predicted protein [Populus trichocarpa] gi|222849848|gb|EEE87395.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = -1

Query: 408 KENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKASQLLELI 250
           +ENA +VLVHLCSGD  HL     HGV+ PL+DLA+NG++RGKRKA QLLE I
Sbjct: 579 RENAAAVLVHLCSGDQKHLVEAQEHGVMGPLVDLAQNGTDRGKRKAQQLLERI 631


>ref|XP_002298363.1| predicted protein [Populus trichocarpa] gi|222845621|gb|EEE83168.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = -1

Query: 408 KENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKASQLLELI 250
           +ENA +VLVHLCSGD  H+     HGV+ PL+DLA+NG++RGKRKA QLLE I
Sbjct: 579 RENAAAVLVHLCSGDQKHMVEAQEHGVMGPLVDLAQNGTDRGKRKAQQLLERI 631


>ref|NP_190235.1| U-box domain-containing protein 13 [Arabidopsis thaliana]
           gi|75266129|sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box
           domain-containing protein 13; AltName: Full=Plant U-box
           protein 13 gi|6523054|emb|CAB62321.1| arm repeat
           containing protein homolog [Arabidopsis thaliana]
           gi|14596007|gb|AAK68731.1| arm repeat containing protein
           homolog [Arabidopsis thaliana]
           gi|22136270|gb|AAM91213.1| arm repeat containing protein
           homolog [Arabidopsis thaliana]
           gi|332644646|gb|AEE78167.1| U-box domain-containing
           protein 13 [Arabidopsis thaliana]
          Length = 660

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = -1

Query: 408 KENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKASQLLELI 250
           +ENA +VLVHLCSGDP HL      G++ PL+DLA NG++RGKRKA+QLLE I
Sbjct: 575 RENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERI 627


>ref|XP_002877490.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323328|gb|EFH53749.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 660

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = -1

Query: 408 KENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKASQLLELI 250
           +ENA +VLVHLCSGDP HL      G++ PL+DLA NG++RGKRKA+QLLE I
Sbjct: 575 RENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERI 627


>ref|XP_002283992.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 682

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/54 (61%), Positives = 44/54 (81%)
 Frame = -1

Query: 408 KENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKASQLLELIG 247
           +ENA +VLVHLC+GD  HL+     GV+ PL+DLA+NG++RGKRKA+QLLE +G
Sbjct: 576 RENAAAVLVHLCAGDQHHLAEAQELGVMGPLVDLAQNGTDRGKRKAAQLLERMG 629


Top