BLASTX nr result

ID: Glycyrrhiza23_contig00032464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032464
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...   223   1e-56
sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-prote...   222   2e-56
dbj|BAH86605.1| U-box protein with unknown function [Lotus japon...   222   2e-56
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr...   219   2e-55
sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protei...   219   2e-55

>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score =  223 bits (569), Expect = 1e-56
 Identities = 112/118 (94%), Positives = 116/118 (98%)
 Frame = +3

Query: 3    GTRKLLGKQTIHSLQIHDGFLYACGSSVDATSGKIFSLSSKMVVGSLSTGLDIHRLAINS 182
            GTRKLLGKQTIHSL+IHDGFL+ACGSSVDA +GKIFSLSSKMVVGSLSTGLDIHR+AINS
Sbjct: 1360 GTRKLLGKQTIHSLRIHDGFLFACGSSVDANAGKIFSLSSKMVVGSLSTGLDIHRIAINS 1419

Query: 183  DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQV 356
            DFIFAGTKFGTIEVWLKDK TRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQV
Sbjct: 1420 DFIFAGTKFGTIEVWLKDKLTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQV 1477


>sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1; AltName:
            Full=Protein cerberus
          Length = 1485

 Score =  222 bits (566), Expect = 2e-56
 Identities = 111/118 (94%), Positives = 115/118 (97%)
 Frame = +3

Query: 3    GTRKLLGKQTIHSLQIHDGFLYACGSSVDATSGKIFSLSSKMVVGSLSTGLDIHRLAINS 182
            GTRKLLGKQTIHSLQIHD +L+ACGSSVDAT+GKIFSLS KMVVGSLSTGLDIHR+AINS
Sbjct: 1364 GTRKLLGKQTIHSLQIHDDYLFACGSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINS 1423

Query: 183  DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQV 356
            DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSD DGMMLFVGSSDGKIQV
Sbjct: 1424 DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDVDGMMLFVGSSDGKIQV 1481


>dbj|BAH86605.1| U-box protein with unknown function [Lotus japonicus]
            gi|254749430|dbj|BAH86606.1| U-box protein with unknown
            function [Lotus japonicus]
          Length = 1477

 Score =  222 bits (566), Expect = 2e-56
 Identities = 111/118 (94%), Positives = 115/118 (97%)
 Frame = +3

Query: 3    GTRKLLGKQTIHSLQIHDGFLYACGSSVDATSGKIFSLSSKMVVGSLSTGLDIHRLAINS 182
            GTRKLLGKQTIHSLQIHD +L+ACGSSVDAT+GKIFSLS KMVVGSLSTGLDIHR+AINS
Sbjct: 1356 GTRKLLGKQTIHSLQIHDDYLFACGSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINS 1415

Query: 183  DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQV 356
            DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSD DGMMLFVGSSDGKIQV
Sbjct: 1416 DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDVDGMMLFVGSSDGKIQV 1473


>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
            gi|358346073|ref|XP_003637097.1| U-box domain-containing
            protein [Medicago truncatula] gi|355480708|gb|AES61911.1|
            U-box domain-containing protein [Medicago truncatula]
            gi|355503032|gb|AES84235.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 1490

 Score =  219 bits (557), Expect = 2e-55
 Identities = 109/118 (92%), Positives = 115/118 (97%)
 Frame = +3

Query: 3    GTRKLLGKQTIHSLQIHDGFLYACGSSVDATSGKIFSLSSKMVVGSLSTGLDIHRLAINS 182
            GTRKLLGKQTIHSLQIHD  L+ACGSS+DAT+GKIFSLSSKMVVGSLSTGLD+HR+AINS
Sbjct: 1369 GTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSKMVVGSLSTGLDVHRVAINS 1428

Query: 183  DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQV 356
            DFIFAGTKFGTIEVWLKDKFTRVASIKMAGG+TKITSL SDADGMMLFVGSSDGKIQV
Sbjct: 1429 DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLASDADGMMLFVGSSDGKIQV 1486


>sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protein ligase LIN; Short=MtLIN
            gi|219522090|gb|ACL14419.1| putative E3 ubiquitin ligase
            [Medicago truncatula] gi|219522092|gb|ACL14420.1|
            putative E3 ubiquitin ligase [Medicago truncatula]
          Length = 1488

 Score =  219 bits (557), Expect = 2e-55
 Identities = 109/118 (92%), Positives = 115/118 (97%)
 Frame = +3

Query: 3    GTRKLLGKQTIHSLQIHDGFLYACGSSVDATSGKIFSLSSKMVVGSLSTGLDIHRLAINS 182
            GTRKLLGKQTIHSLQIHD  L+ACGSS+DAT+GKIFSLSSKMVVGSLSTGLD+HR+AINS
Sbjct: 1367 GTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSKMVVGSLSTGLDVHRVAINS 1426

Query: 183  DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQV 356
            DFIFAGTKFGTIEVWLKDKFTRVASIKMAGG+TKITSL SDADGMMLFVGSSDGKIQV
Sbjct: 1427 DFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLASDADGMMLFVGSSDGKIQV 1484


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