BLASTX nr result

ID: Glycyrrhiza23_contig00032461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032461
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   180   1e-43
ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like ...   174   9e-42
ref|XP_003596940.1| Condensin complex subunit [Medicago truncatu...   130   1e-28
ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   129   3e-28
emb|CBI28838.3| unnamed protein product [Vitis vinifera]              123   1e-26

>ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 680

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/106 (80%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   NSAEELGVDFNCENGADREEYENCTTWSDDHDDQTVVADLGFNDADPTFPSYPQEN-ELF 179
           +SAE+L    N ENG DREEYENCT WSDDHDDQTVVADL +NDADP+F SYPQ+N E F
Sbjct: 320 SSAEDLDNADNNENGFDREEYENCTAWSDDHDDQTVVADLDYNDADPSFSSYPQDNAEQF 379

Query: 180 PSTDPDMDDRFENVDGFLFLSLGFSSKQNAWAGPDHWKYRKSKVSE 317
           PS + DMDDRFENV+G+LFLSLGFSSKQNAWAGPDHWKYRKSKVSE
Sbjct: 380 PSPETDMDDRFENVEGYLFLSLGFSSKQNAWAGPDHWKYRKSKVSE 425


>ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like [Glycine max]
          Length = 668

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/106 (79%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   NSAEELGVDFNCENGADREEYENCTTWSDDHDDQTVVADLGFNDADPTFPSYPQEN-ELF 179
           NSAE+L    N ENG  REEYENC  WSDD DDQTVVAD G+NDADP+FPSYPQ+N E F
Sbjct: 312 NSAEDLDNADNNENGFYREEYENCMAWSDDRDDQTVVADPGYNDADPSFPSYPQDNDEPF 371

Query: 180 PSTDPDMDDRFENVDGFLFLSLGFSSKQNAWAGPDHWKYRKSKVSE 317
           PS + DMD RFENVDG+LFLSLGFSSKQNAWAGPDHWKYRKSKVSE
Sbjct: 372 PSPEIDMDGRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRKSKVSE 417


>ref|XP_003596940.1| Condensin complex subunit [Medicago truncatula]
           gi|355485988|gb|AES67191.1| Condensin complex subunit
           [Medicago truncatula]
          Length = 664

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/104 (57%), Positives = 76/104 (73%)
 Frame = +3

Query: 6   SAEELGVDFNCENGADREEYENCTTWSDDHDDQTVVADLGFNDADPTFPSYPQENELFPS 185
           S++E     +CE GA+ E+YEN  T   +HD+QT V ++G NDADP  PSYPQE E FPS
Sbjct: 317 SSQEFDAAIDCEVGAEMEDYENFPTGPYEHDNQTFVNEMGSNDADPNVPSYPQEEEPFPS 376

Query: 186 TDPDMDDRFENVDGFLFLSLGFSSKQNAWAGPDHWKYRKSKVSE 317
            D +MD+ F NVD +L  SLGF SK+NAWAGPDHW+Y+K+K SE
Sbjct: 377 QDLEMDELFGNVDEYLSFSLGFRSKKNAWAGPDHWQYQKAKGSE 420


>ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 685

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/109 (58%), Positives = 79/109 (72%), Gaps = 4/109 (3%)
 Frame = +3

Query: 3   NSAEELGVDFNC---ENGADREEYENCTTWSDDHDDQTVVADLGFNDADPTFPSYPQENE 173
           +S E+ G +F+       A  +EYEN  +WS+DHD +   A+ G +DADPTFPSY QE E
Sbjct: 324 SSTEKSGEEFDAAIDSELATEKEYENFPSWSNDHDSEAFPAEWGSDDADPTFPSYHQEKE 383

Query: 174 LFPSTDP-DMDDRFENVDGFLFLSLGFSSKQNAWAGPDHWKYRKSKVSE 317
            F S DP DMDD FENVDG+LFLSLGF SK+NAWAG DHWK++K+K SE
Sbjct: 384 PFHSQDPPDMDDIFENVDGYLFLSLGFRSKKNAWAGTDHWKFQKAKGSE 432


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/104 (56%), Positives = 73/104 (70%)
 Frame = +3

Query: 6   SAEELGVDFNCENGADREEYENCTTWSDDHDDQTVVADLGFNDADPTFPSYPQENELFPS 185
           S E++   +N E  +D + +ENC TW+ DHDD+T V D     ADP FP + +E+  F  
Sbjct: 319 SEEQVNSVYN-EAESDVDAFENCNTWTFDHDDRTSVVDEDSYGADPVFPVHHEESGPFTV 377

Query: 186 TDPDMDDRFENVDGFLFLSLGFSSKQNAWAGPDHWKYRKSKVSE 317
            +PDMDDRFE VD +LFLSLGF+SKQNAWAGPDHWKYRK K  E
Sbjct: 378 VEPDMDDRFERVDDYLFLSLGFASKQNAWAGPDHWKYRKVKGPE 421


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