BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032447
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...    67   1e-09
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...    60   2e-07

>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 18/98 (18%)
 Frame = -3

Query: 242  KANDWSTWGKNTDDIQDGGSSRPQEDSWSSGK-------------W---KAESNVGAD-- 117
            K+++WS+WGKN  +I  GGS   Q DSW SGK             W   KAE+  G    
Sbjct: 1766 KSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKLEDDTQKENSGSAWVRNKAETIDGGSEK 1825

Query: 116  VMQDAWQHNSDNVKVNWEAKMSVDSCSWGKPKSPENKS 3
              +DAW         NW+A+  V + SWGKPKS E+++
Sbjct: 1826 PQEDAWNSG------NWKAESKVGNASWGKPKSSESQA 1857



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = -3

Query: 242  KANDWSTWGKNTDDIQDGGSSRPQEDSWSSGKWKAESNVGADVMQDAWQHN-SDNVKVNW 66
            K+N+WS WG N  +I  GGS   QEDSW S KWKA+     +    AW  N +D  K   
Sbjct: 1458 KSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTK--- 1514

Query: 65   EAKMSVDSCSWGKPK 21
                S +   WGK K
Sbjct: 1515 ----SSEWSGWGKKK 1525


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 20/98 (20%)
 Frame = -3

Query: 242  KANDWSTWGKNTDDIQDGGSSRPQEDSWSSGK----WKAESNVGA--DVMQDAWQHNSDN 81
            K+++WS+WGKN  +I  GGS+  Q DSW  GK     K  S  GA  +    AW  N   
Sbjct: 1700 KSSEWSSWGKNKTEIPAGGSANVQNDSWGLGKLNDTQKDNSGCGAWGENSGSAWVRNKAE 1759

Query: 80   V--------------KVNWEAKMSVDSCSWGKPKSPEN 9
                             NW+A+  V + +WGKPKS E+
Sbjct: 1760 TIDGGSEKPQEDAWNSGNWKAESKVGNTTWGKPKSSES 1797